RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ZNF529Q6P280 563 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 NIPAL3Q6P499 406 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 TAS1R1Q7RTX1 841 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 OR5W2Q8NH69 310 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 AGAP4Q96P64 663 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 OSBPL7Q9BZF2 842 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 RAB6CQ9H0N0 254 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 PTTG2Q9NZH5 202 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 MT-CO2P00403 227 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 ALDOBP05062 364 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 EDDM3BP56851 147 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 ZNF840PA6NDX5 716 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 CALCBP10092 127 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 RNASE10Q5GAN6 216 aaKnown RBP15.39■□□□□ 0.05
RGP1-201ENST00000378078 TRAPPC2LQ9UL33 140 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 LOXHD1Q8IVV2 1947 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 A0A096LPI6 279 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 GPR32O75388 356 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 BMPR1AP36894 532 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 SOX4Q06945 474 aaPredicted RBP15.39■□□□□ 0.05
RGP1-201ENST00000378078 IRF4Q15306 451 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 C6orf136Q5SQH8 315 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 OR5AS1Q8N127 324 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 PAK1IP1Q9NWT1 392 aaPredicted RBP15.39■□□□□ 0.05
RGP1-201ENST00000378078 F8W036 122 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 H7C1C5 153 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 RFPL1O75677 317 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 CD46P15529 392 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 LCN6P62502 163 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 BLOC1S1P78537 153 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 TMEM104Q8NE00 496 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 EFSO43281 561 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 JAG1P78504 1218 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 IQCKQ8N0W5 287 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 WDSUB1Q8N9V3 476 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 PBDC1Q9BVG4 233 aa15.39■□□□□ 0.05
RGP1-201ENST00000378078 A0A1W2PPV4 95 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 CRYM-AS1A6NIL9 109 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 UGDHO60701 494 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 TIMP1P01033 207 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 HOXB5P09067 269 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 DAP3P51398 398 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 DEFB103AP81534 67 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SGPP2Q8IWX5 399 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SNIP1Q8TAD8 396 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 TUBA8Q9NY65 449 aaPredicted RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 A8MXE2 369 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 BOLA2-SMG1P6H3BVE0 249 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 APBB3O95704 486 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 EDN1P05305 212 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 DNASE1P24855 282 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 HTR2AP28223 471 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 HNRNPH3P31942 346 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 HTR5AP47898 357 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 ACTC1P68032 377 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 ACTA1P68133 377 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SMIM15Q7Z3B0 74 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SAMD10Q9BYL1 202 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 TRAPPC2LH3BP13 241 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 CNIH1O95406 144 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 CLDN17P56750 224 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SNTB2Q13425 540 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 DCAF12Q5T6F0 453 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 PHOX2BQ99453 314 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SIT1Q9Y3P8 196 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SLC31A2O15432 143 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 ALDOAP04075 364 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 HLA-DMAP28067 261 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SPINT3P49223 89 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 ARSFP54793 590 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SHEQ5VZ18 495 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 B3GNT3Q9Y2A9 372 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SPEF2Q9C093 1822 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 PBX1P40424 430 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 MRPL41Q8IXM3 137 aaKnown RBP15.38■□□□□ 0.05
RGP1-201ENST00000378078 PQLC3Q8N755 202 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 OR7G1Q8NGA0 311 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 NETO1Q8TDF5 533 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 SYT3Q9BQG1 590 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 MMP28Q9H239 520 aa15.38■□□□□ 0.05
RGP1-201ENST00000378078 CSNK1EP49674 416 aaKnown RBP15.37■□□□□ 0.05
RGP1-201ENST00000378078 OR2T4Q8NH00 348 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 ISOC1Q96CN7 298 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 WDR6Q9NNW5 1121 aaKnown RBP15.37■□□□□ 0.05
RGP1-201ENST00000378078 LOC105369274A0A096LPK9 316 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 ATP6V1G1O75348 118 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 MT-ND4P03905 459 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 HTR2BP41595 481 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 VASPP50552 380 aaPredicted RBP15.37■□□□□ 0.05
RGP1-201ENST00000378078 NKX3-2P78367 333 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 KCNAB2Q13303 367 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 IL34Q6ZMJ4 242 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 COX15Q7KZN9 410 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 OR4N4Q8N0Y3 316 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 NAGSQ8N159 534 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 CHRDQ9H2X0 955 aa15.37■□□□□ 0.05
RGP1-201ENST00000378078 PCDHGA7Q9Y5G6 932 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms