RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PSMD4P55036 377 aaKnown RBP19.52■□□□□ 0.71
VRK2-201ENST00000340157 TARDBPQ13148 414 aaKnown RBP eCLIP19.52■□□□□ 0.71
VRK2-201ENST00000340157 OR1Q1Q15612 314 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 C1orf94Q6P1W5 598 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 PAPD4Q6PIY7 484 aaKnown RBP19.52■□□□□ 0.71
VRK2-201ENST00000340157 WDR88Q6ZMY6 472 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 MEX3DQ86XN8 651 aaKnown RBP19.52■□□□□ 0.71
VRK2-201ENST00000340157 GALNT6Q8NCL4 622 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 TSPAN14Q8NG11 270 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 CNIH3Q8TBE1 160 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 METTL21AQ8WXB1 218 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 MR1Q95460 341 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 SLC38A4Q969I6 547 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 CDC6Q99741 560 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 UCK2Q9BZX2 261 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 ARMC7Q9H6L4 198 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 LIN28AQ9H9Z2 209 aaKnown RBP19.52■□□□□ 0.71
VRK2-201ENST00000340157 TESQ9UGI8 421 aaKnown RBP19.52■□□□□ 0.71
VRK2-201ENST00000340157 SLC7A7Q9UM01 511 aa19.52■□□□□ 0.71
VRK2-201ENST00000340157 EP300Q09472 2414 aaPredicted RBP19.51■□□□□ 0.71
VRK2-201ENST00000340157 SERINC4A6NH21 518 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 TFAP2AP05549 437 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 KLK3P07288 261 aaPredicted RBP19.51■□□□□ 0.71
VRK2-201ENST00000340157 IGFBP1P08833 259 aaPredicted RBP19.51■□□□□ 0.71
VRK2-201ENST00000340157 CHMP24386 653 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 UGT2B15P54855 530 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 E2F1Q01094 437 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 IL5RAQ01344 420 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 C6orf141Q5SZD1 244 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 FNDC7Q5VTL7 733 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 APOOLQ6UXV4 268 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 SLC29A4Q7RTT9 530 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 CPEB2Q7Z5Q1 589 aaKnown RBP19.51■□□□□ 0.71
VRK2-201ENST00000340157 TMEM255BQ8WV15 326 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 PHOX2BQ99453 314 aa19.51■□□□□ 0.71
VRK2-201ENST00000340157 MRPS26Q9BYN8 205 aaKnown RBP19.51■□□□□ 0.71
VRK2-201ENST00000340157 TRAPPC13A5PLN9 417 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 ABCB7O75027 752 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 KLF7O75840 302 aaPredicted RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 UTS2O95399 124 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 UMODP07911 640 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 GGT2P36268 569 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 RPS6KA3P51812 740 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 RNF4P78317 190 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 CDK5R2Q13319 367 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 RAB11FIP2Q7L804 512 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 PRICKLE2Q7Z3G6 844 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 SETD9Q8NE22 299 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 ADOQ96SZ5 270 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 STRADBQ9C0K7 418 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 AKAP7Q9P0M2 348 aaPredicted RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 HSPE1-MOB4S4R3N1 261 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 TSPAN2O60636 221 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 CSO75390 466 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 SOX14O95416 240 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 PTGES3Q15185 160 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 CD226Q15762 336 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 DCAF12Q5T6F0 453 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 HLA-DQA1Q5Y7H0 255 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 CMIPQ8IY22 773 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 LINC00471Q8N535 108 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 C17orf47Q8NEP4 570 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 ACOT11Q8WXI4 607 aaPredicted RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 HDAC2Q92769 488 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 APOL4Q9BPW4 351 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 YTHDF1Q9BYJ9 559 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 POLR2J2Q9GZM3 115 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 POLR2J3Q9H1A7 115 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 UBQLN4Q9NRR5 601 aa19.5■□□□□ 0.71
VRK2-201ENST00000340157 NXT1Q9UKK6 140 aaKnown RBP19.5■□□□□ 0.71
VRK2-201ENST00000340157 SDK2Q58EX2 2172 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 ZAR1LA6NP61 321 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 PIP5K1CO60331 668 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 CLPTM1O96005 669 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 CYC1P08574 325 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 OSMP13725 252 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 PTNP21246 168 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 CRHBPP24387 322 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 ABCD3P28288 659 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 OMPP47874 163 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 GTF2A1P52655 376 aaPredicted RBP19.49■□□□□ 0.71
VRK2-201ENST00000340157 CRISP1P54107 249 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 ESRRGP62508 458 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 MAD2L1BPQ15013 274 aaPredicted RBP19.49■□□□□ 0.71
VRK2-201ENST00000340157 NCF4Q15080 339 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 TMEM236Q5W0B7 351 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 CD300LDQ6UXZ3 194 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 ZNF730Q6ZMV8 503 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 C16orf47Q6ZP98 133 aaPredicted RBP19.49■□□□□ 0.71
VRK2-201ENST00000340157 PIP4P1Q86T03 277 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 APLFQ8IW19 511 aaPredicted RBP19.49■□□□□ 0.71
VRK2-201ENST00000340157 ENTHD1Q8IYW4 607 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 FAM71CQ8NEG0 241 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 APH1BQ8WW43 257 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 SGCDQ92629 289 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 LIN37Q96GY3 246 aaPredicted RBP19.49■□□□□ 0.71
VRK2-201ENST00000340157 RTN4RQ9BZR6 473 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 EVA1AQ9H8M9 152 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 FAM86C1Q9NVL1 165 aa19.49■□□□□ 0.71
VRK2-201ENST00000340157 TRIM64CA6NLI5 447 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms