RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 RAI1Q7Z5J4 1906 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-215ENST00000597649 SLC22A20A6NK97 555 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 C16orf97H3BN30 126 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 POLR3GO15318 223 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 CRLF1O75462 422 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 ERAL1O75616 437 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 REM1O75628 298 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 THBDP07204 575 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 POU2F1P14859 743 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 SUCLG1P53597 346 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 SIRPAP78324 504 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 MRPS35P82673 323 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 GALNTL6Q49A17 601 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 COMMD6Q7Z4G1 85 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 UBQLNLQ8IYU4 475 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 TUBGCP3Q96CW5 907 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 APIPQ96GX9 242 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 PPP3R2Q96LZ3 170 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 ADOQ96SZ5 270 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 NUF2Q9BZD4 464 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 LRTM1Q9HBL6 345 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 C1orf109Q9NX04 203 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 ELOVL5Q9NYP7 299 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 ABCA1O95477 2261 aa14.82□□□□□ -0.04
SHKBP1-215ENST00000597649 GNG14A0A1W2PPG7 69 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 FRG2CA6NGY1 282 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 KLF4O43474 513 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 TSPAN2O60636 221 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 PEX11AO75192 247 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 GUCY1B2O75343 617 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 CT45A8P0DMV1 189 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 CT45A9P0DMV2 189 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 PAX1P15863 534 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 CSNK2A2P19784 350 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 DPP4P27487 766 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 MAPK12P53778 367 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 ATP6AP1LQ52LC2 224 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 CT45A2Q5DJT8 189 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 OR2A2Q6IF42 318 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 Q6ZSR9 355 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 PLEKHM3Q6ZWE6 761 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 TMCO6Q96DC7 493 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 CNRIP1Q96F85 164 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 SLC35A4Q96G79 324 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 METTL2AQ96IZ6 378 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 SLC39A3Q9BRY0 314 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 ZNF701Q9NV72 531 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 PRODH2Q9UF12 536 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 SVEP1Q4LDE5 3571 aa14.81□□□□□ -0.04
SHKBP1-215ENST00000597649 C1orf226A1L170 272 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 PCDH7O60245 1069 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 EDF1O60869 148 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 PLAUP00749 431 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 PRPH2P23942 346 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 MAPK1P28482 360 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 NR1H2P55055 460 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 CORO7P57737 925 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 GUSBP1Q15486 140 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 NPSR1Q6W5P4 371 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 OR2T11Q8NH01 316 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 ZNF845Q96IR2 970 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 C3orf30Q96M34 536 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 CCDC134Q9H6E4 229 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 RNF122Q9H9V4 155 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 MEAF6Q9HAF1 191 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 MCM8Q9UJA3 840 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 DKKL1Q9UK85 242 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 ZNF337Q9Y3M9 751 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 CCL27Q9Y4X3 112 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 USH1CQ9Y6N9 552 aa14.8□□□□□ -0.04
SHKBP1-215ENST00000597649 LSM1O15116 133 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 EMC8O43402 210 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 SOX30O94993 753 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 JUNP05412 331 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 CD8BP10966 210 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 TBXA2RP21731 343 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 TIA1P31483 386 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 KCNJ5P48544 419 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 GYS2P54840 703 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 RPL38P63173 70 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 MAD2L1Q13257 205 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 TNK1Q13470 666 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 ZNF628Q5EBL2 1059 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 XKR7Q5GH72 579 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 NXNQ6DKJ4 435 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 CHMP1BQ7LBR1 199 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 CCDC116Q8IYX3 515 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 FADS6Q8N9I5 356 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 FNDC5Q8NAU1 212 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 MAPK1IP1LQ8NDC0 245 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 OR4N2Q8NGD1 307 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 OR5M1Q8NGP8 315 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 FNDC9Q8TBE3 224 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 KLHL29Q96CT2 875 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 VSTM2LQ96N03 204 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 BTBD9Q96Q07 612 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 EBPLQ9BY08 206 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 RTN4RQ9BZR6 473 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 KLHL4Q9C0H6 718 aa14.79□□□□□ -0.04
SHKBP1-215ENST00000597649 DSN1Q9H410 356 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms