RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 FAM215AQ9Y5M1 114 aa19.9■□□□□ 0.78
HOMER3-206ENST00000594439 ASH1LQ9NR48 2969 aaKnown RBP19.9■□□□□ 0.78
HOMER3-206ENST00000594439 A1L4Q6 167 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 SCDO00767 359 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 WDR1O75083 606 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 AGR2O95994 175 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ACTL6AO96019 429 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ZCCHC18P0CG32 403 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 DCTP40126 519 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 KHKP50053 298 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ATP12AP54707 1039 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 GFRA1P56159 465 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 RCAN2Q14206 197 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 SQLEQ14534 574 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 BLOC1S3Q6QNY0 202 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 DNAJC14Q6Y2X3 702 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ZNF808Q8N4W9 903 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ZFP90Q8TF47 636 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ABTB1Q969K4 478 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-206ENST00000594439 PRDM14Q9GZV8 571 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 HOXD1Q9GZZ0 328 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ZNF385DQ9H6B1 395 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 SLC52A3Q9NQ40 469 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 EXD2Q9NVH0 621 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 FGFR1OP2Q9NVK5 253 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 TMEM45AQ9NWC5 275 aa19.89■□□□□ 0.77
HOMER3-206ENST00000594439 FLNBO75369 2602 aaKnown RBP19.89■□□□□ 0.77
HOMER3-206ENST00000594439 ARHGAP21Q5T5U3 1957 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 A0A0G2JND7 137 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 HPGDP15428 266 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 SMSP52788 366 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 B3GALT5-AS1P59052 145 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 FUT5Q11128 374 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 CD226Q15762 336 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 FLYWCH1Q4VC44 716 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 KLHL26Q53HC5 615 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.88■□□□□ 0.771e-8■■■■□ 19.6
HOMER3-206ENST00000594439 C1orf185Q5T7R7 199 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 TMEM211Q6ICI0 200 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 CGB2Q6NT52 195 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 OLIG3Q7RTU3 272 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 C16orf62Q7Z3J2 963 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 IFNEQ86WN2 208 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 ULK2Q8IYT8 1036 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 XAGE5Q8WWM1 108 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 GTF2H4Q92759 462 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 C1GALT1C1Q96EU7 318 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 WDYHV1Q96HA8 205 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 ZNF350Q9GZX5 532 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 PTGES2Q9H7Z7 377 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 HHATLQ9HCP6 504 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 CCDC167Q9P0B6 97 aa19.88■□□□□ 0.77
HOMER3-206ENST00000594439 PLEKHB1Q9UF11 243 aaPredicted RBP19.88■□□□□ 0.77
HOMER3-206ENST00000594439 COL12A1Q99715 3063 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 PRAMEF27A3QJZ7 478 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 HMGN4O00479 90 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 FCMRO60667 390 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 STX11O75558 287 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 GUSBP08236 651 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 HOXD4P09016 255 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 GABRA1P14867 456 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 CD1EP15812 388 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 HK1P19367 917 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 TCEA1P23193 301 aaKnown RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 GCKP35557 465 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 MDH1P40925 334 aaKnown RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 NUP107P57740 925 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 GANABQ14697 944 aaKnown RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 GTDC1Q4AE62 458 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 COX20Q5RI15 118 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 ATAD3BQ5T9A4 648 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 SLC2A7Q6PXP3 512 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 MAMDC2Q7Z304 686 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 MISPQ8IVT2 679 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 SPDL1Q96EA4 605 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 SFXN2Q96NB2 322 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 TMEM120AQ9BXJ8 343 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 NMUR2Q9GZQ4 415 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 PAIP1Q9H074 479 aaKnown RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 ALKBH4Q9NXW9 302 aa19.87■□□□□ 0.77
HOMER3-206ENST00000594439 RPH3AQ9Y2J0 694 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-206ENST00000594439 NR5A2O00482 541 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 KRT75O95678 551 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 VIMP08670 466 aaKnown RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 HOXB9P17482 250 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 NCF2P19878 526 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 CAPN3P20807 821 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 AGAP20933 346 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 MSX1P28360 303 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 RNF144AP50876 292 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 MVDP53602 400 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 TXNL4AP83876 142 aaKnown RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 AGKQ53H12 422 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 C6orf10Q5SRN2 563 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 AP1ARQ63HQ0 302 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 XKRXQ6PP77 449 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 B3GNT6Q6ZMB0 384 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 MTERF4Q7Z6M4 381 aaKnown RBP19.86■□□□□ 0.77
HOMER3-206ENST00000594439 PM20D2Q8IYS1 436 aa19.86■□□□□ 0.77
HOMER3-206ENST00000594439 ZNF527Q8NB42 609 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms