RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 BOLLQ8N9W6 283 aaKnown RBP9.89□□□□□ -0.83
USB1-212ENST00000566082 OR5J2Q8NH18 312 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 THEM6Q8WUY1 208 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TMEM43Q9BTV4 400 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TRPV4Q9HBA0 871 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 COLEC10Q9Y6Z7 277 aa9.89□□□□□ -0.83
USB1-212ENST00000566082 TRBV5-4A0A0C4DH59 114 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 FAM171A2A8MVW0 826 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 XKRYO14609 159 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 SLCO2B1O94956 709 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ZDHHC11BP0C7U3 371 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 GTF2F2P13984 249 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 AHCYP23526 432 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PSMB10P40306 273 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CRYBB2P43320 205 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TAF13Q15543 124 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 NNATQ16517 81 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 HLA-DQA1Q5Y7H0 255 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ARSKQ6UWY0 536 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.88□□□□□ -0.83
USB1-212ENST00000566082 SIAH3Q8IW03 269 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 OR4K14Q8NGD5 310 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PINK1Q9BXM7 581 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 LYARQ9NX58 379 aaKnown RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 FARSAQ9Y285 508 aaKnown RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 RNF13O43567 381 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 SLC25A12O75746 678 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ADH5P11766 374 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CPEP16870 476 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CERS1P27544 350 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 EVX1P49640 407 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ACTC1P68032 377 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ACTA1P68133 377 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 HYAL4Q2M3T9 481 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 COL28A1Q2UY09 1125 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 HBMQ6B0K9 141 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CCSAPQ6IQ19 270 aaPredicted RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 SFXN4Q6P4A7 337 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PDZD9Q8IXQ8 264 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CPA6Q8N4T0 437 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TP53I13Q8NBR0 393 aaPredicted RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 OR2A12Q8NGT7 310 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 B3GNT4Q9C0J1 378 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 SYNPO2LQ9H987 977 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 SLC39A1Q9NY26 324 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 UPB1Q9UBR1 384 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 A0A087WUU8 490 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 C5orf51A6NDU8 294 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 UNCXA6NJT0 531 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TACSTD2P09758 323 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ZNF750Q32MQ0 723 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TOR2AQ5JU69 321 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 RAB12Q6IQ22 244 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PRSS45Q7RTY3 260 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 HDDC3Q8N4P3 179 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 ZNF680Q8NEM1 530 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 CPEB1Q9BZB8 566 aaKnown RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 BARHL1Q9BZE3 327 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TMEM185BQ9H7F4 350 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 KLHL9Q9P2J3 617 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 FTSJ1Q9UET6 329 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 KCNN3Q9UGI6 736 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 SLC23A1Q9UHI7 598 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 DPP7Q9UHL4 492 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 PLEKHA6Q9Y2H5 1048 aa9.88□□□□□ -0.83
USB1-212ENST00000566082 TRIP12Q14669 1992 aaPredicted RBP9.88□□□□□ -0.83
USB1-212ENST00000566082 TMEM129A0AVI4 362 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PLPP1O14494 284 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 CASC3O15234 703 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 GABRA3P34903 492 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ACTR1BP42025 376 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 SLC6A11P48066 632 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 GZMMP51124 257 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 CLDN12P56749 244 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ACTR1AP61163 376 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 INSL4Q14641 139 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 METTL11BQ5VVY1 283 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 NRROSQ86YC3 692 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TMC8Q8IU68 726 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TOR1AIP2Q8NFQ8 470 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 MOAP1Q96BY2 351 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HS6ST2Q96MM7 605 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HCFC1R1Q9NWW0 138 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 OR1A2Q9Y585 309 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 A0A1W2PPL8 197 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ZC3H12DA2A288 527 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 MAS1P04201 325 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ZNF806P0C7X5 589 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ACRP10323 421 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 RFX2P48378 723 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 GDI2P50395 445 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 EIF4EBP2Q13542 120 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 FAM83HQ6ZRV2 1179 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 KANSL1Q7Z3B3 1105 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 LRRC56Q8IYG6 542 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms