RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ZNF687	Q8N1G0	1237 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMCO5A	Q8N6Q1	288 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	MORN4	Q8NDC4	146 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMEM52	Q8NDY8	209 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	FUZ	Q9BT04	418 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	NDC1	Q9BTX1	674 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	LMF2	Q9BU23	707 aa	Known RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLC7A5P2	Q9GIP4	190 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CNIH4	Q9P003	139 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	LRIT1	Q9P2V4	623 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	MRTO4	Q9UKD2	239 aa	Known RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SLCO1B1	Q9Y6L6	691 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	CDH10	Q9Y6N8	788 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	PI4KA	P42356	2102 aa		10.01	□□□□□ -0.81
SPIDR-222	ENST00000524006	SPTB	P11277	2137 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ADAMTS9	Q9P2N4	1935 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006		A0A087WUU8	490 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NPIPA5	A0A0B4J1W7	369 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	UNC119B	A6NIH7	251 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NPIPA7	E9PJI5	369 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006		H0YIG0	161 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TLX2	O43763	284 aa	Predicted RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	FCMR	O60667	390 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	FMO6P	O60774	539 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NKX2-2	O95096	273 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	HMGN1	P05114	100 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NPIPA8	P0DM63	369 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	DBT	P11182	482 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	FBL	P22087	321 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	RPS4Y1	P22090	263 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	SOX6	P35712	828 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	STT3A	P46977	705 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	DHPS	P49366	369 aa	Predicted RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ENTPD1	P49961	510 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	EMP3	P54852	163 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	VBP1	P61758	197 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	EEF1A1	P68104	462 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TUBA1B	P68363	451 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	HSD11B2	P80365	405 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	HOXC5	Q00444	222 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	CSTF1	Q05048	431 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMED1	Q13445	227 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	FZD5	Q13467	585 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TST	Q16762	297 aa	Known RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	SYT16	Q17RD7	645 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	AMZ1	Q400G9	498 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TUBA1A	Q71U36	451 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF550	Q7Z398	422 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NRM	Q8IXM6	262 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	CLIP4	Q8N3C7	705 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	AMER2	Q8N7J2	671 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ZNF527	Q8NB42	609 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	NDNF	Q8TB73	568 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TBC1D15	Q8TC07	691 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	TMEM163	Q8TC26	289 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	GAB3	Q8WWW8	586 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	CLDN23	Q96B33	292 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	CDCA4	Q9BXL8	241 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ALOXE3	Q9BYJ1	711 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	RAB33B	Q9H082	229 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	EGLN3	Q9H6Z9	239 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	PALMD	Q9NP74	551 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	CUTC	Q9NTM9	273 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	METRN	Q9UJH8	293 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	FBXO4	Q9UKT5	387 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	GPR55	Q9Y2T6	319 aa	Predicted RBP	10	□□□□□ -0.81
SPIDR-222	ENST00000524006	MED31	Q9Y3C7	131 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	MMACHC	Q9Y4U1	282 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	RNF215	Q9Y6U7	377 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	ASPM	Q8IZT6	3477 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	MPDZ	O75970	2070 aa		10	□□□□□ -0.81
SPIDR-222	ENST00000524006	UNC13C	Q8NB66	2214 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	GXYLT2	A0PJZ3	443 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	CDHR4	A6H8M9	788 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	SYNDIG1L	A6NDD5	238 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	CCRL2	O00421	344 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	LAMTOR5	O43504	91 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	BRINP1	O60477	761 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	DNAJB6	O75190	326 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	EPPIN	O95925	133 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	CBX7	O95931	251 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	PTH	P01270	115 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	CT62	P0C5K7	136 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	SAG	P10523	405 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	IFI30	P13284	250 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	HPGD	P15428	266 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	BMP7	P18075	431 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	BCKDHB	P21953	392 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	C21orf33	P30042	268 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	S100A5	P33763	92 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	TRHR	P34981	398 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	ATP6V1E1	P36543	226 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	GIPR	P48546	466 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	FNTB	P49356	437 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	SEPHS1	P49903	392 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	COPZ1	P61923	177 aa		9.99	□□□□□ -0.81
SPIDR-222	ENST00000524006	GPLD1	P80108	840 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms