RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DNAJC22Q8N4W6 341 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF441Q8N8Z8 693 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 FAM71CQ8NEG0 241 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SECTM1Q8WVN6 248 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PIK3R3Q92569 461 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SENP8Q96LD8 212 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SPATA13Q96N96 652 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 NAP1L5Q96NT1 182 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 MYCBPQ99417 103 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 RIT2Q99578 217 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 GPA33Q99795 319 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 NFKBIZQ9BYH8 718 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 OR2B2Q9GZK3 357 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 GANQ9H2C0 597 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 LIME1Q9H400 295 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PRSS16Q9NQE7 514 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PHPT1Q9NRX4 125 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PANK4Q9NVE7 773 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 FBXL4Q9UKA2 621 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 PILRAQ9UKJ1 303 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 SCML1Q9UN30 329 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 NSG2Q9Y328 171 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 COLEC10Q9Y6Z7 277 aa4.16□□□□□ -1.74
HMGB1P23-201ENST00000518743 ARID1AO14497 2285 aa4.15□□□□□ -1.74
HMGB1P23-201ENST00000518743 LRP4O75096 1905 aa4.15□□□□□ -1.74
HMGB1P23-201ENST00000518743 ZNF840PA6NDX5 716 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KPNA7A9QM74 516 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCSO14618 274 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CHUKO15111 745 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARPC1BO15143 372 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 SYT7O43581 403 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PRKNO60260 465 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ACSL4O60488 711 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 SMPD2O60906 423 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 HMMRO75330 724 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 AKR7A3O95154 331 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 NR3C1P04150 777 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KRT6BP04259 564 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 EDN1P05305 212 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ACAA1P09110 424 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CT45A8P0DMV1 189 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CT45A9P0DMV2 189 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 DLATP10515 647 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 FGF3P11487 239 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KCNE1P15382 129 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 LHCGRP22888 699 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ANXA13P27216 316 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PKLRP30613 574 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 NUDT1P36639 197 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 MDH1P40925 334 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 MAGEA11P43364 429 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KRT6CP48668 564 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZFP36L1Q07352 338 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KIF5AQ12840 1032 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PDZK1IP1Q13113 114 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 C1orf61Q13536 156 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CST6Q15828 149 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CT45A2Q5DJT8 189 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 HIST2H2AA3Q6FI13 130 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 WDR88Q6ZMY6 472 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 FCRLAQ7L513 359 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KCNMB4Q86W47 210 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CATSPER3Q86XQ3 398 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 SPATA2LQ8IUW3 424 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 MMAAQ8IVH4 418 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCDC185Q8N715 623 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 RNF148Q8N7C7 305 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 MAPKAPK5-AS1Q8N8E1 139 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 NIPA2Q8N8Q9 360 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR7A2PQ8NGA2 310 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR56B1Q8NGI3 324 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR4A16Q8NH70 328 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARHGAP45Q92619 1136 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 KLK6Q92876 244 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAM46BQ96A09 425 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CTRCQ99895 268 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 RHNO1Q9BSD3 238 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM121Q9BTD3 319 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 DDA1Q9BW61 102 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ING2Q9H160 280 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 EVA1AQ9H8M9 152 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 RDH14Q9HBH5 336 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRTM1Q9HBL6 345 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 C6orf50Q9HD87 102 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 STMN3Q9NZ72 180 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PTTG2Q9NZH5 202 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR6C2Q9NZP2 312 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 EXTL2Q9UBQ6 330 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAM153AQ9UHL3 310 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 LSM7Q9UK45 103 aaKnown RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PRDM4Q9UKN5 801 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 ELF5Q9UKW6 265 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 NTNG1Q9Y2I2 539 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 CSNK1G3Q9Y6M4 447 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 GTF3C1Q12789 2109 aa4.15□□□□□ -1.75
HMGB1P23-201ENST00000518743 PCLOQ9Y6V0 5065 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCDC162PA2VCL2 907 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 SMCO2A6NFE2 343 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms