RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 MED8Q96G25 268 aa13.21□□□□□ -0.29
TOP3B-214ENST00000457270 LYSMD1Q96S90 227 aa13.21□□□□□ -0.29
TOP3B-214ENST00000457270 SLC6A16Q9GZN6 736 aa13.21□□□□□ -0.29
TOP3B-214ENST00000457270 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
TOP3B-214ENST00000457270 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SOCS5O75159 536 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 IFNA4P05014 189 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 EIF1P41567 113 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PREPP48147 710 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 RPS26P62854 115 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.33e-11■■□□□ 13.9
TOP3B-214ENST00000457270 MC2RQ01718 297 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PLD1Q13393 1074 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 HTR4Q13639 388 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 GRB14Q14449 540 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ELFN2Q5R3F8 820 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 FAM83HQ6ZRV2 1179 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 OR6V1Q8N148 313 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 OR5M9Q8NGP3 310 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 OR56A3Q8NH54 315 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ZDHHC1Q8WTX9 485 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ZNF251Q9BRH9 671 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 MTG2Q9H4K7 406 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TAAR2Q9P1P5 351 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 NPFFR2Q9Y5X5 522 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TRBV23-1A0A0A0MS06 115 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 HPP00738 406 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ACAA1P09110 424 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SAGP10523 405 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 IFNGR1P15260 489 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ACADLP28330 430 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 CD96P40200 585 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SEC61A1P61619 476 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SLCO4C1Q6ZQN7 724 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 USP50Q70EL3 339 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TSPAN33Q86UF1 283 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 THAP4Q8WY91 577 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 PRRC1Q96M27 445 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ISG20L2Q9H9L3 353 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 GPN3Q9UHW5 284 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 NAP1L6A6NFF2 107 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 M0R3H8 397 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SURF4O15260 269 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 KLKB1P03952 638 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SELLP14151 372 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 UBXN2BQ14CS0 331 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 KIAA1161Q6NSJ0 714 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ZC3H14Q6PJT7 736 aaKnown RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 GLDNQ6ZMI3 551 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 COMTD1Q86VU5 262 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 APCDD1Q8J025 514 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 C12orf45Q8N5I9 185 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 CAMKVQ8NCB2 501 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TOP3B-214ENST00000457270 C2CD4CQ8TF44 421 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 ELP4Q96EB1 424 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 DMRTA2Q96SC8 542 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 CA10Q9NS85 328 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SLC22A11Q9NSA0 550 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 FBXL3Q9UKT7 428 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
TOP3B-214ENST00000457270 TTLL8A6PVC2 850 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HMGN4O00479 90 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 ZNF197O14709 1029 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HIST1H2ABP04908 130 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 ATP1B2P14415 290 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PVALBP20472 110 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 IFNGR2P38484 337 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 E2F1Q01094 437 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 RNASE12Q5GAN4 147 aaKnown RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HIST3H2AQ7L7L0 130 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PXKQ7Z7A4 578 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 HIST1H2ACQ93077 130 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PLD4Q96BZ4 506 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 ZNF285Q96NJ3 590 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
TOP3B-214ENST00000457270 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms