RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 TMPRSS11AQ6ZMR5 421 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 RBCK1Q9BYM8 510 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 ABCB9Q9NP78 766 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 SF3B6Q9Y3B4 125 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 V9GYH0 126 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 MYO15AQ9UKN7 3530 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 GXYLT2A0PJZ3 443 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF10P21506 573 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 GCGRP47871 477 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 PSPHP78330 225 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 FABP5Q01469 135 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 INSL4Q14641 139 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 PLK5Q496M5 336 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 CPOQ8IVL8 374 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 SLC37A2Q8TED4 501 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 DCLRE1CQ96SD1 692 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 PRSS27Q9BQR3 290 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 PRRG3Q9BZD7 231 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF350Q9GZX5 532 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 MED20Q9H944 212 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 TIGARQ9NQ88 270 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 NLGN3Q9NZ94 848 aa17.07■□□□□ 0.32
SHKBP1-201ENST00000291842 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 C2orf74A8MZ97 194 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 H3BQ06 376 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CYR61O00622 381 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 STX11O75558 287 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ZGLP1P0C6A0 271 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 IMPDH2P12268 514 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 GABRA3P34903 492 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 SELENBP1Q13228 472 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 BAK1Q16611 211 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 DGAT2L6Q6ZPD8 337 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ZAR1Q86SH2 424 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 RBM12BQ8IXT5 1001 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF619Q8N2I2 560 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 UFD1Q92890 307 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ITPKCQ96DU7 683 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ARHGAP9Q9BRR9 750 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 TMED9Q9BVK6 235 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 HINT3Q9NQE9 182 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 PLEKHB1Q9UF11 243 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CD207Q9UJ71 328 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 TBC1D24Q9ULP9 559 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 EXOSC1Q9Y3B2 195 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CMAHPQ9Y471 501 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 SEMA4FO95754 770 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 MAKP20794 623 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 DRD1P21728 446 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 DEFA1P59665 94 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 DEFA3P59666 94 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 OR1Q1Q15612 314 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF79Q15937 498 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 RANBP3LQ86VV4 465 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CSNK1A1LQ8N752 337 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF614Q8N883 585 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 OR2T33Q8NG76 320 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 KCTD7Q96MP8 289 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 UBQLN3Q9H347 655 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 TBC1D17Q9HA65 648 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CBLCQ9ULV8 474 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 CDH10Q9Y6N8 788 aa17.06■□□□□ 0.32
SHKBP1-201ENST00000291842 A0A1W2PQL4 384 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 SNX4O95219 450 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 GPR75O95800 540 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 TNFP01375 233 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 ATP1B1P05026 303 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 PRICKLE4Q2TBC4 344 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 PLBD1Q6P4A8 553 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 RFKQ969G6 155 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 SECISBP2Q96T21 854 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 TEX12Q9BXU0 123 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 HDHD5Q9BXW7 423 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 OR52D1Q9H346 318 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 LYRM4Q9HD34 91 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 FAM60AQ9NP50 221 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 MAT2BQ9NZL9 334 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 SPTBP11277 2137 aa17.05■□□□□ 0.32
SHKBP1-201ENST00000291842 IRGMA1A4Y4 181 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 STK25O00506 426 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 SLC30A4O14863 429 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 RDH16O75452 317 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 IL1AP01583 271 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 IFI30P13284 250 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 FXYD6P3P58550 94 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 MRPS21P82921 87 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 TPBGQ13641 420 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 EIPR1Q53HC9 387 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 TAF8Q7Z7C8 310 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 CA13Q8N1Q1 262 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 SIRT6Q8N6T7 355 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 ZNF485Q8NCK3 441 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 OR51G2Q8NGK0 314 aa17.04■□□□□ 0.32
SHKBP1-201ENST00000291842 CCDC3Q9BQI4 270 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms