RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 CCL4P13236 92 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 ATP6V1B1P15313 513 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 DRD5P21918 477 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 CLDN6P56747 220 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 ESRRGP62508 458 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 HOXC5Q00444 222 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TCF15Q12870 199 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 RBM48Q5RL73 367 aaKnown RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 KLHL17Q6TDP4 642 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 GRAMD2AQ8IUY3 354 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TOR1AIP2Q8NFQ8 470 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 OR4K5Q8NGD3 323 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 FBLIM1Q8WUP2 373 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 OIT3Q8WWZ8 545 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 ADIPOR1Q96A54 375 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TSC22D3Q99576 134 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 CMKLR1Q99788 373 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 NUDT9Q9BW91 350 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 CFAP54Q96N23 3096 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 C2orf92A0A1B0GVN3 265 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 ALOX12BO75342 701 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TFAP2AP05549 437 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 CYC1P08574 325 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 NUP107P57740 925 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TUBA4AP68366 448 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 EBPQ15125 230 aaKnown RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 FAAH2Q6GMR7 532 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 SLC29A4Q7RTT9 530 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 METTL21AQ8WXB1 218 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 SLC35B4Q969S0 331 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 SLC41A3Q96GZ6 507 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 LRFN5Q96NI6 719 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 UCK2Q9BZX2 261 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 NXF5Q9H1B4 397 aaKnown RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
VIM-201ENST00000224237 TUBA8Q9NY65 449 aaPredicted RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 MRTO4Q9UKD2 239 aaKnown RBP16.76■□□□□ 0.27
VIM-201ENST00000224237 B4E171 279 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 IFNGR2P38484 337 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 TSPAN7P41732 249 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 TARDBPQ13148 414 aaKnown RBP eCLIP16.75■□□□□ 0.27
VIM-201ENST00000224237 FGFBP1Q14512 234 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 MEP1AQ16819 746 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 CTU2Q2VPK5 515 aaKnown RBP16.75■□□□□ 0.27
VIM-201ENST00000224237 C6orf141Q5SZD1 244 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 HLA-DQA1Q5Y7H0 255 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 ANKRD37Q7Z713 158 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 C9orf40Q8IXQ3 194 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 CMIPQ8IY22 773 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 PRSS33Q8NF86 280 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 GAL3ST4Q96RP7 486 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 SPSB2Q99619 263 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 ADNPQ9H2P0 1102 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 BLOC1S6Q9UL45 172 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 PCDHGA6Q9Y5G7 932 aa16.75■□□□□ 0.27
VIM-201ENST00000224237 EP300Q09472 2414 aaPredicted RBP16.75■□□□□ 0.27
VIM-201ENST00000224237 A0A087WUU8 490 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 A0A087WXM4 84 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 IL33O95760 270 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 KLK3P07288 261 aaPredicted RBP16.74■□□□□ 0.27
VIM-201ENST00000224237 GKN3PP0CG01 181 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 OSMP13725 252 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 EMP2P54851 167 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 COX10Q12887 443 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 ILKQ13418 452 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 TOP3AQ13472 1001 aaPredicted RBP16.74■□□□□ 0.27
VIM-201ENST00000224237 MRPL14Q6P1L8 145 aaKnown RBP16.74■□□□□ 0.27
VIM-201ENST00000224237 C1orf94Q6P1W5 598 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 GDF7Q7Z4P5 450 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 HOXD1Q9GZZ0 328 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 PARD6AQ9NPB6 346 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 NXT1Q9UKK6 140 aaKnown RBP16.74■□□□□ 0.27
VIM-201ENST00000224237 NTNG1Q9Y2I2 539 aa16.74■□□□□ 0.27
VIM-201ENST00000224237 TRAPPC13A5PLN9 417 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 C4orf47A7E2U8 309 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 PRG2P13727 222 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ZNF28P17035 718 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 GGT2P36268 569 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 PLAURQ03405 335 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CDK5R2Q13319 367 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 LCN10Q6JVE6 187 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 CD300LDQ6UXZ3 194 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ZNF730Q6ZMV8 503 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 RRM2BQ7LG56 351 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ZER1Q7Z7L7 766 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 AMER2Q8N7J2 671 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 C17orf47Q8NEP4 570 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 ACOT11Q8WXI4 607 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 EFHD2Q96C19 240 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 COL25A1Q9BXS0 654 aaPredicted RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 STRADBQ9C0K7 418 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 WWTR1Q9GZV5 400 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 WDR54Q9H977 334 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 FAM86C1Q9NVL1 165 aa16.73■□□□□ 0.27
VIM-201ENST00000224237 DNAJB12Q9NXW2 375 aaKnown RBP16.73■□□□□ 0.27
VIM-201ENST00000224237 SLC39A1Q9NY26 324 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms