RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	NMD2	P38798	1089 aa	Known RBP	5.34	□□□□□ -1.55
YTM1	YOR272W	NPP2	P39997	493 aa		5.34	□□□□□ -1.55
YTM1	YOR272W	YKE2	P52553	114 aa		5.34	□□□□□ -1.55
YTM1	YOR272W	PBP1	P53297	722 aa	Known RBP	5.34	□□□□□ -1.55
YTM1	YOR272W	SFB2	P53953	876 aa		5.34	□□□□□ -1.55
YTM1	YOR272W	GAL10	P04397	699 aa		5.33	□□□□□ -1.56
YTM1	YOR272W	SRM1	P21827	482 aa		5.33	□□□□□ -1.56
YTM1	YOR272W	PPG1	P32838	368 aa		5.33	□□□□□ -1.56
YTM1	YOR272W	LAM1	P38851	1228 aa		5.33	□□□□□ -1.56
YTM1	YOR272W	RNH70	P53331	553 aa		5.33	□□□□□ -1.56
YTM1	YOR272W	HSF1	P10961	833 aa		5.32	□□□□□ -1.56
YTM1	YOR272W	SEG2	P34250	1132 aa		5.32	□□□□□ -1.56
YTM1	YOR272W	ZRG8	P40021	1076 aa		5.32	□□□□□ -1.56
YTM1	YOR272W	NTE1	Q04958	1679 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	MMS22	Q06164	1454 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	ERR1	P0CX10	437 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	ERR2	P0CX11	437 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	ENA1	P13587	1091 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	RRP14	P36080	434 aa	Known RBP	5.31	□□□□□ -1.56
YTM1	YOR272W	NIT1	P40447	199 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	IRC24	P40580	263 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	PSP2	P50109	593 aa	Known RBP	5.31	□□□□□ -1.56
YTM1	YOR272W	PRP43	P53131	767 aa	Known RBP	5.31	□□□□□ -1.56
YTM1	YOR272W	YGR012W	P53206	393 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	ENA2	Q01896	1091 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	ENA5	Q12691	1091 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	SMC4	Q12267	1418 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	GEA2	P39993	1459 aa	Known RBP	5.31	□□□□□ -1.56
YTM1	YOR272W	YOR1	P53049	1477 aa		5.31	□□□□□ -1.56
YTM1	YOR272W	RPP2A	P05319	106 aa	Known RBP	5.3	□□□□□ -1.56
YTM1	YOR272W	MET6	P05694	767 aa	Known RBP	5.3	□□□□□ -1.56
YTM1	YOR272W	GAS1	P22146	559 aa	Known RBP	5.3	□□□□□ -1.56
YTM1	YOR272W	RFA1	P22336	621 aa	Known RBP	5.3	□□□□□ -1.56
YTM1	YOR272W	MEF2	P39677	819 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	MND2	P40577	368 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	ALG2	P43636	503 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	NIT3	P49954	291 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	HSV2	P50079	448 aa	Predicted RBP	5.3	□□□□□ -1.56
YTM1	YOR272W	PLB2	Q03674	706 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	ROT1	Q03691	256 aa		5.3	□□□□□ -1.56
YTM1	YOR272W	THI4	P32318	326 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	SRP101	P32916	621 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	TSA1	P34760	196 aa	Known RBP	5.29	□□□□□ -1.56
YTM1	YOR272W	ERT1	P38140	529 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	GDH3	P39708	457 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	DAM1	P53267	343 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	VPS30	Q02948	557 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	POB3	Q04636	552 aa	Known RBP	5.29	□□□□□ -1.56
YTM1	YOR272W	CDA1	Q06702	301 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	TRM732	Q03496	1420 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	NOT3	P06102	836 aa	Known RBP	5.29	□□□□□ -1.56
YTM1	YOR272W	ATG19	P35193	415 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	POA1	P38218	177 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	AVT1	P47082	602 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	RAI1	P53063	387 aa	Known RBP	5.29	□□□□□ -1.56
YTM1	YOR272W	ALG12	P53730	551 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	ENV7	Q12003	364 aa		5.29	□□□□□ -1.56
YTM1	YOR272W	TY1B-JR2	P47100	1755 aa	Known RBP	5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-ER2	Q03619	1755 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-MR1	Q04214	1755 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-MR2	Q04670	1755 aa	Known RBP	5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-LR1	Q12088	1755 aa	Known RBP	5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-NL1	Q12112	1755 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-GR1	Q12141	1755 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	TY1B-BL	Q12490	1755 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	SOD2	P00447	233 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
YTM1	YOR272W	RPS13	P05756	151 aa	Known RBP	5.28	□□□□□ -1.56
YTM1	YOR272W	MPH2	P0CD99	609 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	ELM1	P32801	640 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	EMC3	P36039	253 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	YGR283C	P53336	341 aa	Predicted RBP	5.28	□□□□□ -1.56
YTM1	YOR272W	GCN5	Q03330	439 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	CDA2	Q06703	312 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	RXT3	Q07458	294 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	TPO1	Q07824	586 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	GPB1	Q08886	897 aa		5.28	□□□□□ -1.56
YTM1	YOR272W	BNI1	P41832	1953 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	MSH2	P25847	964 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	STE13	P33894	931 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	RIM8	P53179	542 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	GTF1	P53260	183 aa	Predicted RBP	5.27	□□□□□ -1.57
YTM1	YOR272W	UGO1	Q03327	502 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	YDR132C	Q03900	495 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	DUS4	Q06063	367 aa		5.27	□□□□□ -1.57
YTM1	YOR272W	URN1	Q06525	465 aa	Known RBP	5.27	□□□□□ -1.57
YTM1	YOR272W	RPO21	P04050	1733 aa	Known RBP	5.26	□□□□□ -1.57
YTM1	YOR272W	YRF1-1	P0CX20	1796 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	YRF1-5	P0CX21	1796 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	YRF1-8	P0CX22	1796 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	RAD53	P22216	821 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	AIM3	P38266	947 aa	Known RBP	5.26	□□□□□ -1.57
YTM1	YOR272W	MET12	P46151	657 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
YTM1	YOR272W	NOG2	P53742	486 aa	Known RBP	5.26	□□□□□ -1.57
YTM1	YOR272W	YDR514C	Q04408	483 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	ADY3	Q07732	790 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	YPL277C	Q08989	487 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	STU1	P38198	1513 aa		5.26	□□□□□ -1.57
YTM1	YOR272W	SPP41	P38904	1435 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms