RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C CTF4Q01454 927 aa3.74□□□□□ -1.81
LCB4YOR171C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
LCB4YOR171C ATG16Q03818 150 aa3.74□□□□□ -1.81
LCB4YOR171C XYL2Q07993 356 aa3.74□□□□□ -1.81
LCB4YOR171C MED7Q08278 222 aa3.74□□□□□ -1.81
LCB4YOR171C MSH2P25847 964 aa3.73□□□□□ -1.81
LCB4YOR171C FUN30P31380 1131 aa3.73□□□□□ -1.81
LCB4YOR171C DOM34P33309 386 aa3.73□□□□□ -1.81
LCB4YOR171C YKR078WP36158 585 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C VID27P40157 782 aa3.73□□□□□ -1.81
LCB4YOR171C HSV2P50079 448 aaPredicted RBP3.73□□□□□ -1.81
LCB4YOR171C PRP43P53131 767 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C SFB2P53953 876 aa3.73□□□□□ -1.81
LCB4YOR171C UTP14Q04500 899 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C YOR378WQ08902 515 aa3.73□□□□□ -1.81
LCB4YOR171C FOB1O13329 566 aa3.73□□□□□ -1.81
LCB4YOR171C CYB2P00175 591 aa3.73□□□□□ -1.81
LCB4YOR171C SPS1P08458 490 aa3.73□□□□□ -1.81
LCB4YOR171C YBR238CP38330 731 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C YER158CP40095 573 aa3.73□□□□□ -1.81
LCB4YOR171C SEC26P41810 973 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C SEC27P41811 889 aaKnown RBP3.73□□□□□ -1.81
LCB4YOR171C YKE2P52553 114 aa3.73□□□□□ -1.81
LCB4YOR171C PEX8P53248 589 aa3.73□□□□□ -1.81
LCB4YOR171C HSP42Q12329 375 aa3.73□□□□□ -1.81
LCB4YOR171C RNA1P11745 407 aaKnown RBP3.72□□□□□ -1.81
LCB4YOR171C MEP1P40260 492 aa3.72□□□□□ -1.81
LCB4YOR171C DJP1P40564 432 aa3.72□□□□□ -1.81
LCB4YOR171C CTH1P47976 325 aa3.72□□□□□ -1.81
LCB4YOR171C GPI8P49018 411 aa3.72□□□□□ -1.81
LCB4YOR171C ORC3P54790 616 aa3.72□□□□□ -1.81
LCB4YOR171C HEL2Q05580 639 aaKnown RBP3.72□□□□□ -1.81
LCB4YOR171C NTG2Q08214 380 aa3.72□□□□□ -1.81
LCB4YOR171C MPH2P0CD99 609 aa3.71□□□□□ -1.82
LCB4YOR171C MEF1P25039 761 aa3.71□□□□□ -1.82
LCB4YOR171C BRF1P29056 596 aa3.71□□□□□ -1.82
LCB4YOR171C REC104P33323 182 aa3.71□□□□□ -1.82
LCB4YOR171C RFC5P38251 354 aa3.71□□□□□ -1.82
LCB4YOR171C YAP1801P38856 637 aa3.71□□□□□ -1.82
LCB4YOR171C ALG2P43636 503 aa3.71□□□□□ -1.82
LCB4YOR171C BFA1P47113 574 aa3.71□□□□□ -1.82
LCB4YOR171C CCM1P48237 864 aaPredicted RBP3.71□□□□□ -1.82
LCB4YOR171C PHM6Q05637 104 aa3.71□□□□□ -1.82
LCB4YOR171C GRC3Q07845 632 aa3.71□□□□□ -1.82
LCB4YOR171C APL5Q08951 932 aaKnown RBP3.71□□□□□ -1.82
LCB4YOR171C CFT2Q12102 859 aaPredicted RBP3.71□□□□□ -1.82
LCB4YOR171C MRC1P25588 1096 aa3.71□□□□□ -1.82
LCB4YOR171C SCT1P32784 759 aa3.71□□□□□ -1.82
LCB4YOR171C HSP78P33416 811 aa3.71□□□□□ -1.82
LCB4YOR171C PAF1P38351 445 aa3.71□□□□□ -1.82
LCB4YOR171C GYP8P43570 497 aa3.71□□□□□ -1.82
LCB4YOR171C ALO1P54783 526 aaKnown RBP3.71□□□□□ -1.82
LCB4YOR171C PRP3Q03338 469 aaPredicted RBP3.71□□□□□ -1.82
LCB4YOR171C RCF1Q03713 159 aa3.71□□□□□ -1.82
LCB4YOR171C ENV7Q12003 364 aa3.71□□□□□ -1.82
LCB4YOR171C SLX4Q12098 748 aa3.71□□□□□ -1.82
LCB4YOR171C OSW2Q12202 724 aa3.71□□□□□ -1.82
LCB4YOR171C INH1P01097 85 aa3.7□□□□□ -1.82
LCB4YOR171C CDC48P25694 835 aaKnown RBP3.7□□□□□ -1.82
LCB4YOR171C APL1P27351 700 aa3.7□□□□□ -1.82
LCB4YOR171C PUB1P32588 453 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
LCB4YOR171C MTC2P34246 357 aa3.7□□□□□ -1.82
LCB4YOR171C CRP1P38845 465 aaKnown RBP3.7□□□□□ -1.82
LCB4YOR171C IES5P40060 125 aa3.7□□□□□ -1.82
LCB4YOR171C SXM1Q04175 944 aaKnown RBP3.7□□□□□ -1.82
LCB4YOR171C SIZ1Q04195 904 aa3.7□□□□□ -1.82
LCB4YOR171C BRE4Q07660 1125 aa3.7□□□□□ -1.82
LCB4YOR171C CLF1Q12309 687 aaPredicted RBP3.7□□□□□ -1.82
LCB4YOR171C MDM12Q92328 271 aa3.7□□□□□ -1.82
LCB4YOR171C RAD51P25454 400 aa3.69□□□□□ -1.82
LCB4YOR171C SAS3P34218 831 aa3.69□□□□□ -1.82
LCB4YOR171C ECM21P38167 1117 aaKnown RBP3.69□□□□□ -1.82
LCB4YOR171C YGR283CP53336 341 aaPredicted RBP3.69□□□□□ -1.82
LCB4YOR171C UGO1Q03327 502 aa3.69□□□□□ -1.82
LCB4YOR171C MSC2Q03455 724 aa3.69□□□□□ -1.82
LCB4YOR171C IRC3Q06683 689 aa3.69□□□□□ -1.82
LCB4YOR171C YDL177CQ12257 170 aa3.69□□□□□ -1.82
LCB4YOR171C RRI2Q12348 645 aa3.69□□□□□ -1.82
LCB4YOR171C PHR1P05066 565 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
LCB4YOR171C KIN2P13186 1147 aaKnown RBP3.69□□□□□ -1.82
LCB4YOR171C SRM1P21827 482 aa3.69□□□□□ -1.82
LCB4YOR171C RAD53P22216 821 aa3.69□□□□□ -1.82
LCB4YOR171C RPC82P32349 654 aa3.69□□□□□ -1.82
LCB4YOR171C SPC29P33419 253 aa3.69□□□□□ -1.82
LCB4YOR171C PEX6P33760 1030 aa3.69□□□□□ -1.82
LCB4YOR171C EMC3P36039 253 aa3.69□□□□□ -1.82
LCB4YOR171C PEA2P40091 420 aa3.69□□□□□ -1.82
LCB4YOR171C DAS1P47005 663 aa3.69□□□□□ -1.82
LCB4YOR171C INP52P50942 1183 aa3.69□□□□□ -1.82
LCB4YOR171C YNL058CP53947 316 aa3.69□□□□□ -1.82
LCB4YOR171C RSM24Q03976 319 aa3.69□□□□□ -1.82
LCB4YOR171C YPR196WQ06595 470 aa3.69□□□□□ -1.82
LCB4YOR171C RTP1Q12751 981 aa3.69□□□□□ -1.82
LCB4YOR171C NOP14Q99207 810 aaKnown RBP3.69□□□□□ -1.82
LCB4YOR171C RPL8AP17076 256 aaKnown RBP3.68□□□□□ -1.82
LCB4YOR171C JNM1P36224 373 aa3.68□□□□□ -1.82
LCB4YOR171C ETP1P38748 585 aaKnown RBP3.68□□□□□ -1.82
LCB4YOR171C FOL2P51601 243 aaKnown RBP3.68□□□□□ -1.82
LCB4YOR171C SGT2Q12118 346 aaKnown RBP3.68□□□□□ -1.82
LCB4YOR171C CEX1Q12453 761 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms