RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W NIT1P40447 199 aa6.68□□□□□ -1.34
CTR3YLR411W SGD1Q06132 899 aa6.68□□□□□ -1.34
CTR3YLR411W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
CTR3YLR411W ADE8P04161 214 aa6.67□□□□□ -1.34
CTR3YLR411W SRP40P32583 406 aaPredicted RBP6.67□□□□□ -1.34
CTR3YLR411W CCC2P38995 1004 aa6.67□□□□□ -1.34
CTR3YLR411W GYP7P48365 746 aa6.67□□□□□ -1.34
CTR3YLR411W YSP2Q06681 1438 aa6.67□□□□□ -1.34
CTR3YLR411W TY3B-IQ7LHG5 1498 aaKnown RBP6.66□□□□□ -1.34
CTR3YLR411W NPP1P25353 742 aa6.66□□□□□ -1.34
CTR3YLR411W RNQ1P25367 405 aa6.66□□□□□ -1.34
CTR3YLR411W CDC11P32458 415 aa6.66□□□□□ -1.34
CTR3YLR411W YKR078WP36158 585 aaKnown RBP6.66□□□□□ -1.34
CTR3YLR411W YRO2P38079 344 aa6.66□□□□□ -1.34
CTR3YLR411W LAM1P38851 1228 aa6.66□□□□□ -1.34
CTR3YLR411W RSP5P39940 809 aaKnown RBP6.66□□□□□ -1.34
CTR3YLR411W PRP43P53131 767 aaKnown RBP6.66□□□□□ -1.34
CTR3YLR411W PLB2Q03674 706 aa6.66□□□□□ -1.34
CTR3YLR411W YOR352WQ08816 343 aa6.66□□□□□ -1.34
CTR3YLR411W HBN1Q96VH4 193 aa6.66□□□□□ -1.34
CTR3YLR411W ECM21P38167 1117 aaKnown RBP6.65□□□□□ -1.34
CTR3YLR411W TSL1P38427 1098 aaKnown RBP6.65□□□□□ -1.34
CTR3YLR411W SFB2P53953 876 aa6.65□□□□□ -1.34
CTR3YLR411W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
CTR3YLR411W TAF8Q03750 510 aa6.65□□□□□ -1.34
CTR3YLR411W BUL2Q03758 920 aaKnown RBP6.65□□□□□ -1.34
CTR3YLR411W NUP157P40064 1391 aaKnown RBP6.65□□□□□ -1.35
CTR3YLR411W RPA190P10964 1664 aaKnown RBP6.65□□□□□ -1.35
CTR3YLR411W YBR284WP38150 797 aa6.64□□□□□ -1.35
CTR3YLR411W YER158CP40095 573 aa6.64□□□□□ -1.35
CTR3YLR411W RPN4Q03465 531 aa6.64□□□□□ -1.35
CTR3YLR411W ROT1Q03691 256 aa6.64□□□□□ -1.35
CTR3YLR411W YKL091CP33324 310 aaKnown RBP6.63□□□□□ -1.35
CTR3YLR411W AIM3P38266 947 aaKnown RBP6.63□□□□□ -1.35
CTR3YLR411W MEF2P39677 819 aa6.63□□□□□ -1.35
CTR3YLR411W HUL4P40985 892 aa6.63□□□□□ -1.35
CTR3YLR411W YDR132CQ03900 495 aa6.63□□□□□ -1.35
CTR3YLR411W LCD1Q04377 747 aa6.63□□□□□ -1.35
CTR3YLR411W PPM2Q08282 695 aa6.63□□□□□ -1.35
CTR3YLR411W YPR071WQ12346 211 aa6.63□□□□□ -1.35
CTR3YLR411W YOR131CQ12486 218 aa6.63□□□□□ -1.35
CTR3YLR411W RAV1P47104 1357 aa6.62□□□□□ -1.35
CTR3YLR411W RPC82P32349 654 aa6.62□□□□□ -1.35
CTR3YLR411W ERT1P38140 529 aa6.62□□□□□ -1.35
CTR3YLR411W YBR238CP38330 731 aaKnown RBP6.62□□□□□ -1.35
CTR3YLR411W GGA2P38817 585 aaKnown RBP6.62□□□□□ -1.35
CTR3YLR411W YKE2P52553 114 aa6.62□□□□□ -1.35
CTR3YLR411W IOC4Q04213 475 aa6.62□□□□□ -1.35
CTR3YLR411W YPL277CQ08989 487 aa6.62□□□□□ -1.35
CTR3YLR411W RTC1Q08281 1341 aa6.61□□□□□ -1.35
CTR3YLR411W SOD2P00447 233 aa6.61□□□□□ -1.35
CTR3YLR411W CAN1P04817 590 aa6.61□□□□□ -1.35
CTR3YLR411W TOP3P13099 656 aa6.61□□□□□ -1.35
CTR3YLR411W PRP6P19735 899 aaPredicted RBP6.61□□□□□ -1.35
CTR3YLR411W CDC48P25694 835 aaKnown RBP6.61□□□□□ -1.35
CTR3YLR411W PET10P36139 283 aa6.61□□□□□ -1.35
CTR3YLR411W ZRG8P40021 1076 aa6.61□□□□□ -1.35
CTR3YLR411W TOK1P40310 691 aa6.61□□□□□ -1.35
CTR3YLR411W MND2P40577 368 aa6.61□□□□□ -1.35
CTR3YLR411W RIM8P53179 542 aa6.61□□□□□ -1.35
CTR3YLR411W GCN5Q03330 439 aa6.61□□□□□ -1.35
CTR3YLR411W DUS4Q06063 367 aa6.61□□□□□ -1.35
CTR3YLR411W YDL124WQ07551 312 aaKnown RBP6.61□□□□□ -1.35
CTR3YLR411W BUD3P25558 1636 aa6.61□□□□□ -1.35
CTR3YLR411W RPS13P05756 151 aaKnown RBP6.6□□□□□ -1.35
CTR3YLR411W MSD1P15179 658 aaKnown RBP6.6□□□□□ -1.35
CTR3YLR411W GAL11P19659 1081 aa6.6□□□□□ -1.35
CTR3YLR411W BET3P36149 193 aa6.6□□□□□ -1.35
CTR3YLR411W PBP2P38151 413 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CTR3YLR411W BUD6P41697 788 aa6.6□□□□□ -1.35
CTR3YLR411W CCM1P48237 864 aaPredicted RBP6.6□□□□□ -1.35
CTR3YLR411W RTA1P53047 317 aa6.6□□□□□ -1.35
CTR3YLR411W YPR196WQ06595 470 aa6.6□□□□□ -1.35
CTR3YLR411W CDA1Q06702 301 aa6.6□□□□□ -1.35
CTR3YLR411W LTE1P07866 1435 aa6.59□□□□□ -1.35
CTR3YLR411W MET5P47169 1442 aa6.59□□□□□ -1.35
CTR3YLR411W ENA1P13587 1091 aa6.59□□□□□ -1.35
CTR3YLR411W SRP101P32916 621 aa6.59□□□□□ -1.35
CTR3YLR411W THI80P35202 319 aa6.59□□□□□ -1.35
CTR3YLR411W YGR012WP53206 393 aa6.59□□□□□ -1.35
CTR3YLR411W PBP1P53297 722 aaKnown RBP6.59□□□□□ -1.35
CTR3YLR411W ENA2Q01896 1091 aa6.59□□□□□ -1.35
CTR3YLR411W ENA5Q12691 1091 aa6.59□□□□□ -1.35
CTR3YLR411W RPP0P05317 312 aaKnown RBP6.58□□□□□ -1.36
CTR3YLR411W CDC6P09119 513 aa6.58□□□□□ -1.36
CTR3YLR411W HSF1P10961 833 aa6.58□□□□□ -1.36
CTR3YLR411W REC104P33323 182 aa6.58□□□□□ -1.36
CTR3YLR411W CHZ1P40019 153 aaPredicted RBP6.58□□□□□ -1.36
CTR3YLR411W IRC24P40580 263 aa6.58□□□□□ -1.36
CTR3YLR411W GTF1P53260 183 aaPredicted RBP6.58□□□□□ -1.36
CTR3YLR411W DOM34P33309 386 aa6.57□□□□□ -1.36
CTR3YLR411W ESL2P36168 1195 aa6.57□□□□□ -1.36
CTR3YLR411W UBP6P43593 499 aaKnown RBP6.57□□□□□ -1.36
CTR3YLR411W SPT20P50875 604 aa6.57□□□□□ -1.36
CTR3YLR411W PDS5Q04264 1277 aa6.57□□□□□ -1.36
CTR3YLR411W TPO1Q07824 586 aa6.57□□□□□ -1.36
CTR3YLR411W GPB1Q08886 897 aa6.57□□□□□ -1.36
CTR3YLR411W YOR093CQ12275 1648 aa6.57□□□□□ -1.36
CTR3YLR411W BNR1P40450 1375 aa6.57□□□□□ -1.36
CTR3YLR411W POA1P38218 177 aa6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms