RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ALR1Q08269 859 aa3.85□□□□□ -1.79
SSM4YIL030C SUP35P05453 685 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C PCK1P10963 549 aa3.84□□□□□ -1.79
SSM4YIL030C PDR1P12383 1068 aa3.84□□□□□ -1.79
SSM4YIL030C SRV2P17555 526 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C SEC20P28791 383 aa3.84□□□□□ -1.79
SSM4YIL030C MGM1P32266 881 aa3.84□□□□□ -1.79
SSM4YIL030C MVD1P32377 396 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C NPR2P39923 615 aa3.84□□□□□ -1.79
SSM4YIL030C YNL115CP53925 644 aa3.84□□□□□ -1.79
SSM4YIL030C SRL4Q03085 281 aa3.84□□□□□ -1.79
SSM4YIL030C RBA50Q04418 439 aa3.84□□□□□ -1.79
SSM4YIL030C SPP382Q06411 708 aaPredicted RBP3.84□□□□□ -1.79
SSM4YIL030C YDL114WQ07530 308 aa3.84□□□□□ -1.79
SSM4YIL030C MTF2P10849 440 aa3.84□□□□□ -1.79
SSM4YIL030C CDC42P19073 191 aa3.84□□□□□ -1.79
SSM4YIL030C BAS1P22035 811 aa3.84□□□□□ -1.79
SSM4YIL030C PRP45P28004 379 aaPredicted RBP3.84□□□□□ -1.79
SSM4YIL030C MCM5P29496 775 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C RFC3P38629 340 aa3.84□□□□□ -1.79
SSM4YIL030C DMA1P38823 416 aa3.84□□□□□ -1.79
SSM4YIL030C TIF4631P39935 952 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C VID27P40157 782 aa3.84□□□□□ -1.79
SSM4YIL030C YBP2P53169 641 aa3.84□□□□□ -1.79
SSM4YIL030C YTP1P53584 459 aa3.84□□□□□ -1.79
SSM4YIL030C SHR3Q02774 210 aa3.84□□□□□ -1.79
SSM4YIL030C SHE9Q04172 456 aa3.84□□□□□ -1.79
SSM4YIL030C URH1Q04179 340 aa3.84□□□□□ -1.79
SSM4YIL030C ERB1Q04660 807 aaKnown RBP3.84□□□□□ -1.79
SSM4YIL030C YDR222WQ04925 415 aa3.84□□□□□ -1.79
SSM4YIL030C YDL121CQ07541 149 aa3.84□□□□□ -1.79
SSM4YIL030C PET122P10355 254 aa3.84□□□□□ -1.8
SSM4YIL030C RNA1P11745 407 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C KRE2P27809 442 aa3.84□□□□□ -1.8
SSM4YIL030C VPH2P32341 215 aa3.84□□□□□ -1.8
SSM4YIL030C TYE7P33122 291 aaPredicted RBP3.84□□□□□ -1.8
SSM4YIL030C YBR062CP38239 180 aa3.84□□□□□ -1.8
SSM4YIL030C IES5P40060 125 aa3.84□□□□□ -1.8
SSM4YIL030C YMR147WP40218 223 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C PFK26P40433 827 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C GCN20P43535 752 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C CCT8P47079 568 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C RAT1Q02792 1006 aaKnown RBP3.84□□□□□ -1.8
SSM4YIL030C YPL109CQ02981 657 aa3.84□□□□□ -1.8
SSM4YIL030C ATG16Q03818 150 aa3.84□□□□□ -1.8
SSM4YIL030C YMR018WQ04364 514 aa3.84□□□□□ -1.8
SSM4YIL030C COQ9Q05779 260 aa3.84□□□□□ -1.8
SSM4YIL030C INO1P11986 533 aa3.83□□□□□ -1.8
SSM4YIL030C WHI2P12611 486 aa3.83□□□□□ -1.8
SSM4YIL030C KIP1P28742 1111 aa3.83□□□□□ -1.8
SSM4YIL030C TFC3P34111 1160 aa3.83□□□□□ -1.8
SSM4YIL030C CTR1P49573 406 aa3.83□□□□□ -1.8
SSM4YIL030C UBA2P52488 636 aa3.83□□□□□ -1.8
SSM4YIL030C YNL108CP53929 270 aa3.83□□□□□ -1.8
SSM4YIL030C UME1Q03010 460 aa3.83□□□□□ -1.8
SSM4YIL030C RNH1Q04740 348 aa3.83□□□□□ -1.8
SSM4YIL030C SNF1P06782 633 aaKnown RBP3.83□□□□□ -1.8
SSM4YIL030C PHO91P27514 894 aa3.83□□□□□ -1.8
SSM4YIL030C CAJ1P39101 391 aa3.83□□□□□ -1.8
SSM4YIL030C NBP1P52919 319 aaPredicted RBP3.83□□□□□ -1.8
SSM4YIL030C COBP00163 385 aa3.83□□□□□ -1.8
SSM4YIL030C ATP6P00854 259 aa3.83□□□□□ -1.8
SSM4YIL030C BI2P03873 423 aa3.83□□□□□ -1.8
SSM4YIL030C BI4P03879 638 aa3.83□□□□□ -1.8
SSM4YIL030C CIT2P08679 460 aa3.83□□□□□ -1.8
SSM4YIL030C IMA3P0CW40 589 aa3.83□□□□□ -1.8
SSM4YIL030C IMA4P0CW41 589 aa3.83□□□□□ -1.8
SSM4YIL030C THR4P16120 514 aaKnown RBP3.83□□□□□ -1.8
SSM4YIL030C SPS22P25380 463 aa3.83□□□□□ -1.8
SSM4YIL030C DPH5P32469 300 aaPredicted RBP3.83□□□□□ -1.8
SSM4YIL030C ZUO1P32527 433 aaKnown RBP3.83□□□□□ -1.8
SSM4YIL030C BAP2P38084 609 aa3.83□□□□□ -1.8
SSM4YIL030C JEM1P40358 645 aa3.83□□□□□ -1.8
SSM4YIL030C AIM21P40563 679 aa3.83□□□□□ -1.8
SSM4YIL030C SBE2P42223 864 aaKnown RBP3.83□□□□□ -1.8
SSM4YIL030C URB2P47108 1174 aa3.83□□□□□ -1.8
SSM4YIL030C CSR1Q06705 408 aaKnown RBP3.83□□□□□ -1.8
SSM4YIL030C IMA2Q08295 589 aa3.83□□□□□ -1.8
SSM4YIL030C BI3Q9ZZW7 517 aa3.83□□□□□ -1.8
SSM4YIL030C RME1P32338 300 aaKnown RBP3.82□□□□□ -1.8
SSM4YIL030C TFA2P36145 328 aa3.82□□□□□ -1.8
SSM4YIL030C GVP36P40531 326 aaKnown RBP3.82□□□□□ -1.8
SSM4YIL030C ZAP1P47043 880 aa3.82□□□□□ -1.8
SSM4YIL030C UFD2P54860 961 aa3.82□□□□□ -1.8
SSM4YIL030C YPR089WO13585 888 aa3.82□□□□□ -1.8
SSM4YIL030C GCR1P07261 785 aa3.82□□□□□ -1.8
SSM4YIL030C KAR3P17119 729 aa3.82□□□□□ -1.8
SSM4YIL030C YKL133CP36066 463 aa3.82□□□□□ -1.8
SSM4YIL030C ENP2P48234 707 aaKnown RBP3.82□□□□□ -1.8
SSM4YIL030C MFM1Q02783 413 aa3.82□□□□□ -1.8
SSM4YIL030C RSM24Q03976 319 aa3.82□□□□□ -1.8
SSM4YIL030C YDR278CQ05612 105 aa3.82□□□□□ -1.8
SSM4YIL030C ENV9Q08651 330 aa3.82□□□□□ -1.8
SSM4YIL030C STT4P37297 1900 aa3.82□□□□□ -1.8
SSM4YIL030C RAP1P11938 827 aa3.82□□□□□ -1.8
SSM4YIL030C RGP1P16664 663 aa3.82□□□□□ -1.8
SSM4YIL030C TSR4P25040 408 aa3.82□□□□□ -1.8
SSM4YIL030C BUD23P25627 275 aaPredicted RBP3.82□□□□□ -1.8
SSM4YIL030C CPR3P25719 182 aa3.82□□□□□ -1.8
SSM4YIL030C PGM2P37012 569 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms