RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NEM1YHR004C TRM11Q12463 433 aa6.41□□□□□ -1.38
NEM1YHR004C FBP1P09201 348 aa6.4□□□□□ -1.39
NEM1YHR004C SEC21P32074 935 aaKnown RBP6.4□□□□□ -1.39
NEM1YHR004C CTF13P35203 478 aa6.4□□□□□ -1.39
NEM1YHR004C FRE5Q08908 694 aa6.4□□□□□ -1.39
NEM1YHR004C RFA1P22336 621 aaKnown RBP6.39□□□□□ -1.39
NEM1YHR004C YIL108WP40483 696 aaKnown RBP6.39□□□□□ -1.39
NEM1YHR004C YRO2P38079 344 aa6.38□□□□□ -1.39
NEM1YHR004C YHL017WP38745 532 aa6.38□□□□□ -1.39
NEM1YHR004C SNM1P40993 198 aa6.38□□□□□ -1.39
NEM1YHR004C CCM1P48237 864 aaPredicted RBP6.38□□□□□ -1.39
NEM1YHR004C OPI10Q08202 246 aa6.38□□□□□ -1.39
NEM1YHR004C TRM13Q12383 476 aa6.38□□□□□ -1.39
NEM1YHR004C NPP1P25353 742 aa6.37□□□□□ -1.39
NEM1YHR004C TYE7P33122 291 aaPredicted RBP6.37□□□□□ -1.39
NEM1YHR004C MRP8P35719 219 aa6.37□□□□□ -1.39
NEM1YHR004C SIT1P39980 628 aa6.37□□□□□ -1.39
NEM1YHR004C SDS3P40505 327 aa6.37□□□□□ -1.39
NEM1YHR004C CTF8P38877 133 aa6.36□□□□□ -1.39
NEM1YHR004C ELO3P40319 345 aa6.36□□□□□ -1.39
NEM1YHR004C PIN2Q12057 282 aa6.36□□□□□ -1.39
NEM1YHR004C NDJ1Q12366 352 aa6.36□□□□□ -1.39
NEM1YHR004C CAF20P12962 161 aaKnown RBP6.35□□□□□ -1.39
NEM1YHR004C PPS1P38148 807 aa6.35□□□□□ -1.39
NEM1YHR004C PBY1P38254 753 aa6.35□□□□□ -1.39
NEM1YHR004C RPD3P32561 433 aa6.34□□□□□ -1.39
NEM1YHR004C CEP3P40969 608 aa6.33□□□□□ -1.4
NEM1YHR004C YKR011CQ02209 353 aa6.33□□□□□ -1.4
NEM1YHR004C SVF1Q05515 481 aa6.33□□□□□ -1.4
NEM1YHR004C ADY4Q05955 493 aa6.33□□□□□ -1.4
NEM1YHR004C AFR1P33304 620 aa6.32□□□□□ -1.4
NEM1YHR004C GFA1P14742 717 aaKnown RBP6.31□□□□□ -1.4
NEM1YHR004C RPP1P38786 293 aa6.31□□□□□ -1.4
NEM1YHR004C IRR1P40541 1150 aa6.31□□□□□ -1.4
NEM1YHR004C LCD1Q04377 747 aa6.31□□□□□ -1.4
NEM1YHR004C MRH1Q12117 320 aaPredicted RBP6.31□□□□□ -1.4
NEM1YHR004C TUB3P09734 445 aaKnown RBP6.3□□□□□ -1.4
NEM1YHR004C MSL5Q12186 476 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
NEM1YHR004C RPS9AO13516 197 aaKnown RBP6.29□□□□□ -1.4
NEM1YHR004C PRP9P19736 530 aaKnown RBP6.29□□□□□ -1.4
NEM1YHR004C PRI2P20457 528 aa6.29□□□□□ -1.4
NEM1YHR004C YHR078WP38799 552 aa6.29□□□□□ -1.4
NEM1YHR004C NGG1P32494 702 aa6.28□□□□□ -1.4
NEM1YHR004C REC104P33323 182 aa6.28□□□□□ -1.4
NEM1YHR004C FKH2P41813 862 aa6.28□□□□□ -1.4
NEM1YHR004C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
NEM1YHR004C AMA1P50082 593 aa6.28□□□□□ -1.4
NEM1YHR004C PUS2P53167 370 aa6.28□□□□□ -1.4
NEM1YHR004C CRR1Q05790 422 aa6.28□□□□□ -1.4
NEM1YHR004C CDC43P18898 376 aa6.27□□□□□ -1.41
NEM1YHR004C URA1P28272 314 aaPredicted RBP6.27□□□□□ -1.41
NEM1YHR004C CDC11P32458 415 aa6.27□□□□□ -1.41
NEM1YHR004C YKL069WP36088 180 aa6.27□□□□□ -1.41
NEM1YHR004C HDA1P53973 706 aa6.27□□□□□ -1.41
NEM1YHR004C MUP1P50276 574 aa6.26□□□□□ -1.41
NEM1YHR004C PKH1Q03407 766 aa6.26□□□□□ -1.41
NEM1YHR004C HCA4P20448 770 aaKnown RBP6.25□□□□□ -1.41
NEM1YHR004C RIA1P53893 1110 aa6.25□□□□□ -1.41
NEM1YHR004C JIP5Q06214 492 aaPredicted RBP6.25□□□□□ -1.41
NEM1YHR004C TOK1P40310 691 aa6.25□□□□□ -1.41
NEM1YHR004C VHR1P40522 640 aa6.25□□□□□ -1.41
NEM1YHR004C PPZ2P33329 710 aa6.24□□□□□ -1.41
NEM1YHR004C TDP1P38319 544 aa6.24□□□□□ -1.41
NEM1YHR004C YJL163CP46996 555 aa6.24□□□□□ -1.41
NEM1YHR004C BUL2Q03758 920 aaKnown RBP6.24□□□□□ -1.41
NEM1YHR004C ILV6P25605 309 aaKnown RBP6.23□□□□□ -1.41
NEM1YHR004C PZF1P39933 429 aa6.23□□□□□ -1.41
NEM1YHR004C MPH2P0CD99 609 aa6.22□□□□□ -1.41
NEM1YHR004C PEX2P32800 271 aa6.22□□□□□ -1.41
NEM1YHR004C PCL5P38794 229 aa6.22□□□□□ -1.41
NEM1YHR004C ASI2P53895 289 aa6.22□□□□□ -1.41
NEM1YHR004C HBS1P32769 611 aaKnown RBP6.21□□□□□ -1.42
NEM1YHR004C YBR053CP38235 358 aa6.21□□□□□ -1.42
NEM1YHR004C KIN3P22209 435 aa6.2□□□□□ -1.42
NEM1YHR004C SPF1P39986 1215 aaKnown RBP6.2□□□□□ -1.42
NEM1YHR004C VPS73P53142 486 aaKnown RBP6.2□□□□□ -1.42
NEM1YHR004C MRPS35P53292 345 aa6.2□□□□□ -1.42
NEM1YHR004C COQ11Q05892 277 aa6.2□□□□□ -1.42
NEM1YHR004C TUB1P09733 447 aaKnown RBP6.19□□□□□ -1.42
NEM1YHR004C CYS3P31373 394 aaKnown RBP6.19□□□□□ -1.42
NEM1YHR004C ERT1P38140 529 aa6.19□□□□□ -1.42
NEM1YHR004C YIR042CP40586 236 aa6.19□□□□□ -1.42
NEM1YHR004C NIT3P49954 291 aa6.19□□□□□ -1.42
NEM1YHR004C NOG2P53742 486 aaKnown RBP6.19□□□□□ -1.42
NEM1YHR004C DUS1P53759 423 aaKnown RBP6.19□□□□□ -1.42
NEM1YHR004C TDA5Q06417 326 aaKnown RBP6.19□□□□□ -1.42
NEM1YHR004C YPR071WQ12346 211 aa6.19□□□□□ -1.42
NEM1YHR004C PRP4P20053 465 aaKnown RBP6.18□□□□□ -1.42
NEM1YHR004C VAC8P39968 578 aa6.18□□□□□ -1.42
NEM1YHR004C TAH11P47112 604 aa6.18□□□□□ -1.42
NEM1YHR004C HSV2P50079 448 aaPredicted RBP6.18□□□□□ -1.42
NEM1YHR004C IMO32P53219 342 aa6.18□□□□□ -1.42
NEM1YHR004C NRG1Q03125 231 aa6.18□□□□□ -1.42
NEM1YHR004C SUT2Q12286 268 aa6.18□□□□□ -1.42
NEM1YHR004C YNL162W-AQ3E7A8 72 aa6.18□□□□□ -1.42
NEM1YHR004C STE5P32917 917 aa6.17□□□□□ -1.42
NEM1YHR004C YBR184WP38299 523 aa6.17□□□□□ -1.42
NEM1YHR004C RIX1P38883 763 aaPredicted RBP6.17□□□□□ -1.42
NEM1YHR004C YIL166CP40445 542 aa6.17□□□□□ -1.42
NEM1YHR004C HOF1Q05080 669 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 144.9 ms