RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RXT2P38255 430 aa6.25□□□□□ -1.41
SKN1YGR143W MDV1P47025 714 aa6.25□□□□□ -1.41
SKN1YGR143W RPA14P50106 137 aa6.25□□□□□ -1.41
SKN1YGR143W YGR122WP53272 402 aa6.25□□□□□ -1.41
SKN1YGR143W RAD33Q04231 177 aa6.25□□□□□ -1.41
SKN1YGR143W DON1Q05610 365 aa6.25□□□□□ -1.41
SKN1YGR143W VPS36Q06696 566 aa6.25□□□□□ -1.41
SKN1YGR143W VAS1P07806 1104 aaKnown RBP6.25□□□□□ -1.41
SKN1YGR143W PMR1P13586 950 aa6.25□□□□□ -1.41
SKN1YGR143W TSR4P25040 408 aa6.25□□□□□ -1.41
SKN1YGR143W KRR1P25586 316 aaPredicted RBP6.25□□□□□ -1.41
SKN1YGR143W MSH2P25847 964 aa6.25□□□□□ -1.41
SKN1YGR143W ICL1P28240 557 aaPredicted RBP6.25□□□□□ -1.41
SKN1YGR143W XRS2P33301 854 aa6.25□□□□□ -1.41
SKN1YGR143W VPS51P36116 164 aa6.25□□□□□ -1.41
SKN1YGR143W BOI1P38041 980 aaKnown RBP6.25□□□□□ -1.41
SKN1YGR143W PSY4P38193 441 aa6.25□□□□□ -1.41
SKN1YGR143W YBL028CP38202 106 aa6.25□□□□□ -1.41
SKN1YGR143W YIL092WP40497 633 aa6.25□□□□□ -1.41
SKN1YGR143W VTC4P47075 721 aa6.25□□□□□ -1.41
SKN1YGR143W YKR005CQ02203 525 aa6.25□□□□□ -1.41
SKN1YGR143W UBP16Q02863 499 aa6.25□□□□□ -1.41
SKN1YGR143W ERO1Q03103 563 aa6.25□□□□□ -1.41
SKN1YGR143W TAF11Q04226 346 aa6.25□□□□□ -1.41
SKN1YGR143W ATG17Q06410 417 aa6.25□□□□□ -1.41
SKN1YGR143W YDR306CQ06640 478 aa6.25□□□□□ -1.41
SKN1YGR143W SOG2Q08817 791 aa6.25□□□□□ -1.41
SKN1YGR143W PDE2P06776 526 aa6.24□□□□□ -1.41
SKN1YGR143W PMA2P19657 947 aa6.24□□□□□ -1.41
SKN1YGR143W SET3P36124 751 aa6.24□□□□□ -1.41
SKN1YGR143W ABZ1P37254 787 aaPredicted RBP6.24□□□□□ -1.41
SKN1YGR143W ISM1P48526 1002 aa6.24□□□□□ -1.41
SKN1YGR143W YLR271WQ06152 274 aa6.24□□□□□ -1.41
SKN1YGR143W SYO1Q07395 620 aa6.24□□□□□ -1.41
SKN1YGR143W PGK1P00560 416 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W REP1P03871 373 aa6.24□□□□□ -1.41
SKN1YGR143W SES1P07284 462 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W RPB2P08518 1224 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W PRE10P21242 288 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SKN1YGR143W DAL7P21826 554 aa6.24□□□□□ -1.41
SKN1YGR143W PDB1P32473 366 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W SSO1P32867 290 aa6.24□□□□□ -1.41
SKN1YGR143W KES1P35844 434 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W CDC27P38042 758 aa6.24□□□□□ -1.41
SKN1YGR143W YHL012WP38709 493 aa6.24□□□□□ -1.41
SKN1YGR143W GEM1P39722 662 aa6.24□□□□□ -1.41
SKN1YGR143W EIS1Q05050 843 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W OPY2Q06810 360 aa6.24□□□□□ -1.41
SKN1YGR143W ATG9Q12142 997 aa6.24□□□□□ -1.41
SKN1YGR143W MAK21Q12176 1025 aaKnown RBP6.24□□□□□ -1.41
SKN1YGR143W HAT1Q12341 374 aa6.24□□□□□ -1.41
SKN1YGR143W YPR089WO13585 888 aa6.23□□□□□ -1.41
SKN1YGR143W SEC2P17065 759 aa6.23□□□□□ -1.41
SKN1YGR143W YKL063CP35725 167 aa6.23□□□□□ -1.41
SKN1YGR143W OCT1P35999 772 aa6.23□□□□□ -1.41
SKN1YGR143W DID4P36108 232 aa6.23□□□□□ -1.41
SKN1YGR143W NUP133P36161 1157 aa6.23□□□□□ -1.41
SKN1YGR143W JNM1P36224 373 aa6.23□□□□□ -1.41
SKN1YGR143W LIN1P38852 340 aaPredicted RBP6.23□□□□□ -1.41
SKN1YGR143W VID27P40157 782 aa6.23□□□□□ -1.41
SKN1YGR143W YGR153WP48238 217 aa6.23□□□□□ -1.41
SKN1YGR143W ALT1P52893 592 aa6.23□□□□□ -1.41
SKN1YGR143W MDR1P53258 950 aa6.23□□□□□ -1.41
SKN1YGR143W MUB1Q03162 620 aa6.23□□□□□ -1.41
SKN1YGR143W DIB1Q06819 143 aaPredicted RBP6.23□□□□□ -1.41
SKN1YGR143W APC11Q12157 165 aa6.23□□□□□ -1.41
SKN1YGR143W YBL113CQ7M4S9 792 aa6.23□□□□□ -1.41
SKN1YGR143W MRP7P12687 371 aa6.22□□□□□ -1.41
SKN1YGR143W TAL1P15019 335 aaKnown RBP6.22□□□□□ -1.41
SKN1YGR143W DIT1P21623 536 aa6.22□□□□□ -1.41
SKN1YGR143W YJU2P28320 278 aaPredicted RBP6.22□□□□□ -1.41
SKN1YGR143W FRD1P32614 470 aaKnown RBP6.22□□□□□ -1.41
SKN1YGR143W PEX14P53112 341 aa6.22□□□□□ -1.41
SKN1YGR143W UBP2Q01476 1272 aa6.22□□□□□ -1.41
SKN1YGR143W FIN1Q03898 291 aa6.22□□□□□ -1.41
SKN1YGR143W DYN3Q04949 312 aa6.22□□□□□ -1.41
SKN1YGR143W SVF1Q05515 481 aa6.22□□□□□ -1.41
SKN1YGR143W SWA2Q06677 668 aa6.22□□□□□ -1.41
SKN1YGR143W YDL124WQ07551 312 aaKnown RBP6.22□□□□□ -1.41
SKN1YGR143W ADE3P07245 946 aaKnown RBP6.22□□□□□ -1.41
SKN1YGR143W MNN2P38069 597 aa6.22□□□□□ -1.41
SKN1YGR143W DYS1P38791 387 aa6.22□□□□□ -1.41
SKN1YGR143W MBP1P39678 833 aa6.22□□□□□ -1.41
SKN1YGR143W ZRG8P40021 1076 aa6.22□□□□□ -1.41
SKN1YGR143W CST6P40535 587 aa6.22□□□□□ -1.41
SKN1YGR143W YIL001WP40560 513 aa6.22□□□□□ -1.41
SKN1YGR143W NPA3P47122 385 aa6.22□□□□□ -1.41
SKN1YGR143W MIG2P53035 382 aa6.22□□□□□ -1.41
SKN1YGR143W FYV6P53913 173 aa6.22□□□□□ -1.41
SKN1YGR143W CWC21Q03375 135 aaKnown RBP6.22□□□□□ -1.41
SKN1YGR143W THR1P17423 357 aaKnown RBP6.21□□□□□ -1.41
SKN1YGR143W PHO3P24031 467 aa6.21□□□□□ -1.41
SKN1YGR143W ATP3P38077 311 aaKnown RBP6.21□□□□□ -1.41
SKN1YGR143W VPS29P38759 282 aa6.21□□□□□ -1.41
SKN1YGR143W YNL144CP53907 740 aa6.21□□□□□ -1.41
SKN1YGR143W SFH1Q06168 426 aa6.21□□□□□ -1.41
SKN1YGR143W YOR289WQ12012 251 aaPredicted RBP6.21□□□□□ -1.41
SKN1YGR143W FAS2P19097 1887 aaKnown RBP6.21□□□□□ -1.41
SKN1YGR143W TOM70P07213 617 aaKnown RBP6.21□□□□□ -1.42
SKN1YGR143W HOM3P10869 527 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms