RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C CEP3P40969 608 aa6.17□□□□□ -1.42
SCL1YGL011C GTF1P53260 183 aaPredicted RBP6.17□□□□□ -1.42
SCL1YGL011C MRPL22P53881 309 aa6.17□□□□□ -1.42
SCL1YGL011C LRS4Q04087 347 aaKnown RBP6.17□□□□□ -1.42
SCL1YGL011C SPE1P08432 466 aa6.16□□□□□ -1.42
SCL1YGL011C SRD1P09007 221 aa6.16□□□□□ -1.42
SCL1YGL011C SFP1P32432 683 aa6.16□□□□□ -1.42
SCL1YGL011C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SCL1YGL011C GCV2P49095 1034 aa6.16□□□□□ -1.42
SCL1YGL011C NOG2P53742 486 aaKnown RBP6.16□□□□□ -1.42
SCL1YGL011C SSL1Q04673 461 aaPredicted RBP6.16□□□□□ -1.42
SCL1YGL011C REH1Q06709 432 aa6.16□□□□□ -1.42
SCL1YGL011C RPS9AO13516 197 aaKnown RBP6.15□□□□□ -1.42
SCL1YGL011C RAD18P10862 487 aa6.15□□□□□ -1.42
SCL1YGL011C LAM1P38851 1228 aa6.15□□□□□ -1.42
SCL1YGL011C YNL193WP53870 558 aa6.15□□□□□ -1.42
SCL1YGL011C YKR011CQ02209 353 aa6.15□□□□□ -1.42
SCL1YGL011C VPS30Q02948 557 aa6.15□□□□□ -1.42
SCL1YGL011C TPO1Q07824 586 aa6.15□□□□□ -1.42
SCL1YGL011C YLR001CQ07895 862 aa6.15□□□□□ -1.42
SCL1YGL011C YOR352WQ08816 343 aa6.15□□□□□ -1.42
SCL1YGL011C TYE7P33122 291 aaPredicted RBP6.14□□□□□ -1.43
SCL1YGL011C STO1P34160 861 aaKnown RBP6.14□□□□□ -1.43
SCL1YGL011C SEG2P34250 1132 aa6.14□□□□□ -1.43
SCL1YGL011C MCD4P36051 919 aa6.14□□□□□ -1.43
SCL1YGL011C POA1P38218 177 aa6.14□□□□□ -1.43
SCL1YGL011C HXT16P47185 567 aa6.14□□□□□ -1.43
SCL1YGL011C ECL1P48235 211 aa6.14□□□□□ -1.43
SCL1YGL011C PSP2P50109 593 aaKnown RBP6.14□□□□□ -1.43
SCL1YGL011C WHI4Q07655 649 aaKnown RBP6.14□□□□□ -1.43
SCL1YGL011C ADY3Q07732 790 aa6.14□□□□□ -1.43
SCL1YGL011C CYS3P31373 394 aaKnown RBP6.13□□□□□ -1.43
SCL1YGL011C CRP1P38845 465 aaKnown RBP6.13□□□□□ -1.43
SCL1YGL011C MEF2P39677 819 aa6.13□□□□□ -1.43
SCL1YGL011C YIL108WP40483 696 aaKnown RBP6.13□□□□□ -1.43
SCL1YGL011C ZDS1P50111 915 aaKnown RBP6.13□□□□□ -1.43
SCL1YGL011C CAF16P43569 289 aa6.12□□□□□ -1.43
SCL1YGL011C ALY2P47029 1046 aa6.12□□□□□ -1.43
SCL1YGL011C GCN5Q03330 439 aa6.12□□□□□ -1.43
SCL1YGL011C YDR132CQ03900 495 aa6.12□□□□□ -1.43
SCL1YGL011C DUS4Q06063 367 aa6.12□□□□□ -1.43
SCL1YGL011C YOR022CQ12204 715 aa6.12□□□□□ -1.43
SCL1YGL011C CDC6P09119 513 aa6.11□□□□□ -1.43
SCL1YGL011C GAS1P22146 559 aaKnown RBP6.11□□□□□ -1.43
SCL1YGL011C EMC1P25574 760 aa6.11□□□□□ -1.43
SCL1YGL011C PCL2P25693 308 aa6.11□□□□□ -1.43
SCL1YGL011C TSA1P34760 196 aaKnown RBP6.11□□□□□ -1.43
SCL1YGL011C SAP190P36123 1033 aa6.11□□□□□ -1.43
SCL1YGL011C PUS2P53167 370 aa6.11□□□□□ -1.43
SCL1YGL011C PBP1P53297 722 aaKnown RBP6.11□□□□□ -1.43
SCL1YGL011C YNR029CP53729 429 aaKnown RBP6.11□□□□□ -1.43
SCL1YGL011C CDA2Q06703 312 aa6.11□□□□□ -1.43
SCL1YGL011C GPB1Q08886 897 aa6.11□□□□□ -1.43
SCL1YGL011C HMI1Q12039 706 aa6.11□□□□□ -1.43
SCL1YGL011C HAL9Q12180 1030 aa6.11□□□□□ -1.43
SCL1YGL011C YBR182C-AQ8TGU6 64 aa6.11□□□□□ -1.43
SCL1YGL011C PRC1P00729 532 aa6.1□□□□□ -1.43
SCL1YGL011C TSR4P25040 408 aa6.1□□□□□ -1.43
SCL1YGL011C RLP7P40693 322 aaKnown RBP6.1□□□□□ -1.43
SCL1YGL011C MET12P46151 657 aa6.1□□□□□ -1.43
SCL1YGL011C HLJ1P48353 224 aa6.1□□□□□ -1.43
SCL1YGL011C SNP1Q00916 300 aaPredicted RBP6.1□□□□□ -1.43
SCL1YGL011C YDR338CQ05497 695 aa6.1□□□□□ -1.43
SCL1YGL011C FBP1P09201 348 aa6.09□□□□□ -1.43
SCL1YGL011C AIM3P38266 947 aaKnown RBP6.09□□□□□ -1.43
SCL1YGL011C SET5P38890 526 aaKnown RBP6.09□□□□□ -1.43
SCL1YGL011C VPS62P53285 467 aa6.09□□□□□ -1.43
SCL1YGL011C SDA1P53313 767 aaKnown RBP6.09□□□□□ -1.43
SCL1YGL011C DUS1P53759 423 aaKnown RBP6.09□□□□□ -1.43
SCL1YGL011C YAP6Q03935 383 aa6.09□□□□□ -1.43
SCL1YGL011C DIF1O13577 133 aa6.08□□□□□ -1.44
SCL1YGL011C RPS13P05756 151 aaKnown RBP6.08□□□□□ -1.44
SCL1YGL011C SFL1P20134 766 aa6.08□□□□□ -1.44
SCL1YGL011C HOG1P32485 435 aa6.08□□□□□ -1.44
SCL1YGL011C GRX4P32642 244 aa6.08□□□□□ -1.44
SCL1YGL011C UBP12P39538 1254 aa6.08□□□□□ -1.44
SCL1YGL011C SHR5P41912 237 aa6.08□□□□□ -1.44
SCL1YGL011C SPT20P50875 604 aa6.08□□□□□ -1.44
SCL1YGL011C MET13P53128 600 aa6.08□□□□□ -1.44
SCL1YGL011C RXT3Q07458 294 aa6.08□□□□□ -1.44
SCL1YGL011C YPL277CQ08989 487 aa6.08□□□□□ -1.44
SCL1YGL011C HIS5P07172 385 aa6.07□□□□□ -1.44
SCL1YGL011C HMG1P12683 1054 aa6.07□□□□□ -1.44
SCL1YGL011C MIH1P23748 554 aa6.07□□□□□ -1.44
SCL1YGL011C ATG19P35193 415 aa6.07□□□□□ -1.44
SCL1YGL011C MGS1P40151 587 aa6.07□□□□□ -1.44
SCL1YGL011C URM1P40554 99 aaPredicted RBP6.07□□□□□ -1.44
SCL1YGL011C AIM14P53109 570 aa6.07□□□□□ -1.44
SCL1YGL011C YGL081WP53156 320 aa6.07□□□□□ -1.44
SCL1YGL011C CRR1Q05790 422 aa6.07□□□□□ -1.44
SCL1YGL011C ACK1Q07622 623 aaPredicted RBP6.07□□□□□ -1.44
SCL1YGL011C THI73Q07904 523 aa6.07□□□□□ -1.44
SCL1YGL011C THI21Q08975 551 aa6.07□□□□□ -1.44
SCL1YGL011C UPC2Q12151 913 aa6.07□□□□□ -1.44
SCL1YGL011C NUP145P49687 1317 aa6.06□□□□□ -1.44
SCL1YGL011C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
SCL1YGL011C CDC20P26309 610 aa6.06□□□□□ -1.44
SCL1YGL011C YEL1P34225 687 aa6.06□□□□□ -1.44
SCL1YGL011C PCM1P38628 557 aaKnown RBP6.06□□□□□ -1.44
SCL1YGL011C CTF8P38877 133 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms