RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	RFC5	P38251	354 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	ATG3	P40344	310 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	YGL081W	P53156	320 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	DIP5	P53388	608 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	YPL034W	Q03083	165 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	OYE2	Q03558	400 aa	Known RBP	5.69	□□□□□ -1.5
RPN12	YFR052W	TY1A-DR2	Q03964	440 aa	Known RBP	5.69	□□□□□ -1.5
RPN12	YFR052W	TRS120	Q04183	1289 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	ECM30	Q06673	1274 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	ELG1	Q12050	791 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	DCS2	Q12123	353 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	GET3	Q12154	354 aa	Known RBP	5.69	□□□□□ -1.5
RPN12	YFR052W	YLL058W	Q12198	575 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	LAA1	P39526	2014 aa		5.69	□□□□□ -1.5
RPN12	YFR052W	LEU1	P07264	779 aa	Known RBP	5.68	□□□□□ -1.5
RPN12	YFR052W	THR4	P16120	514 aa	Known RBP	5.68	□□□□□ -1.5
RPN12	YFR052W	RDS2	P19541	446 aa	Known RBP	5.68	□□□□□ -1.5
RPN12	YFR052W	GSY1	P23337	708 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	GPT2	P36148	743 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	FIR1	P40020	876 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	RPL34B	P40525	121 aa	Known RBP	5.68	□□□□□ -1.5
RPN12	YFR052W	INP51	P40559	946 aa	Known RBP	5.68	□□□□□ -1.5
RPN12	YFR052W	SAD1	P43589	448 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	CSM3	Q04659	317 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	SVF1	Q05515	481 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	GPI13	Q07830	1017 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	PSK2	Q08217	1101 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	STB3	Q12427	513 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	RTP1	Q12751	981 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	YDR524C-B	Q3E6R4	66 aa		5.68	□□□□□ -1.5
RPN12	YFR052W	PGK1	P00560	416 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	ENO1	P00924	437 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	TUF1	P02992	437 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	HIP1	P06775	603 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	PRX1	P34227	261 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	MSC7	P38694	644 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	STT3	P39007	718 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	ULP2	P40537	1034 aa	Predicted RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	GPD2	P41911	440 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	HUL5	P53119	910 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	PIL1	P53252	339 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	RET3	P53600	189 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	MFM1	Q02783	413 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	EIS1	Q05050	843 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	CRD1	Q07560	283 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	SLK19	Q08581	821 aa	Known RBP	5.67	□□□□□ -1.5
RPN12	YFR052W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
RPN12	YFR052W	YPL150W	Q12152	901 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	PTC5	Q12511	572 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	ATG11	Q12527	1178 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	TAO3	P40468	2376 aa		5.67	□□□□□ -1.5
RPN12	YFR052W	YLR422W	Q06409	1932 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	SWI5	P08153	709 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	KIN82	P25341	720 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	SRO9	P25567	434 aa	Known RBP	5.66	□□□□□ -1.5
RPN12	YFR052W	CDC48	P25694	835 aa	Known RBP	5.66	□□□□□ -1.5
RPN12	YFR052W	PEP12	P32854	288 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	TIM23	P32897	222 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	TVP38	P36164	337 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	PSP2	P50109	593 aa	Known RBP	5.66	□□□□□ -1.5
RPN12	YFR052W	MSC2	Q03455	724 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	MCA1	Q08601	432 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	YOR296W	Q08748	1289 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	CEX1	Q12453	761 aa		5.66	□□□□□ -1.5
RPN12	YFR052W	PCT1	P13259	424 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	CLN3	P13365	580 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	RGP1	P16664	663 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	URA1	P28272	314 aa	Predicted RBP	5.65	□□□□□ -1.5
RPN12	YFR052W	DUR3	P33413	735 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	TTI1	P36097	1038 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	TVP23	P38962	199 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	YEL025C	P39991	1188 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	YIR014W	P40570	242 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	SGM1	P47166	707 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	YGR153W	P48238	217 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	ZPR1	P53303	486 aa	Known RBP	5.65	□□□□□ -1.5
RPN12	YFR052W	SDA1	P53313	767 aa	Known RBP	5.65	□□□□□ -1.5
RPN12	YFR052W	PGA2	P53903	129 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	TIP41	Q12199	356 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	NBL1	Q3E7Y6	73 aa		5.65	□□□□□ -1.5
RPN12	YFR052W	SNA3	P14359	133 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	MBR1	P23493	339 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	CAD1	P24813	409 aa	Known RBP	5.64	□□□□□ -1.51
RPN12	YFR052W	RDS1	P25611	832 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	SUV3	P32580	737 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	PGM1	P33401	570 aa	Known RBP	5.64	□□□□□ -1.51
RPN12	YFR052W	MAL33	P38157	468 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	PIH1	P38768	344 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	HMF1	P40037	129 aa	Known RBP	5.64	□□□□□ -1.51
RPN12	YFR052W	FIS1	P40515	155 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	AZR1	P50080	613 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	TPO2	P53283	614 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	CNM67	P53865	581 aa	Known RBP	5.64	□□□□□ -1.51
RPN12	YFR052W	YNL165W	P53891	406 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	PHM6	Q05637	104 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	ADY4	Q05955	493 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	YLH47	Q06493	454 aa		5.64	□□□□□ -1.51
RPN12	YFR052W	HXK1	P04806	485 aa	Known RBP	5.63	□□□□□ -1.51
RPN12	YFR052W	DED1	P06634	604 aa	Known RBP	5.63	□□□□□ -1.51
RPN12	YFR052W	BIK1	P11709	440 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms