RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W VTH1P40438 1549 aa5.83□□□□□ -1.48
UBP9YER098W VTH2P40890 1549 aa5.83□□□□□ -1.48
UBP9YER098W RPL11AP0C0W9 174 aaKnown RBP5.83□□□□□ -1.48
UBP9YER098W AEP2P22136 580 aa5.83□□□□□ -1.48
UBP9YER098W GDT1P38301 280 aaPredicted RBP5.83□□□□□ -1.48
UBP9YER098W CKB2P38930 258 aa5.83□□□□□ -1.48
UBP9YER098W VPS4P52917 437 aa5.83□□□□□ -1.48
UBP9YER098W GUP1P53154 560 aa5.83□□□□□ -1.48
UBP9YER098W MEC3Q02574 474 aa5.83□□□□□ -1.48
UBP9YER098W RPL11BQ3E757 174 aaPredicted RBP5.83□□□□□ -1.48
UBP9YER098W NFS1P25374 497 aa5.82□□□□□ -1.48
UBP9YER098W RPN12P32496 274 aa5.82□□□□□ -1.48
UBP9YER098W NIC96P34077 839 aa5.82□□□□□ -1.48
UBP9YER098W REI1P38344 393 aaPredicted RBP5.82□□□□□ -1.48
UBP9YER098W YAR028WP39548 234 aa5.82□□□□□ -1.48
UBP9YER098W CIR1P42940 261 aa5.82□□□□□ -1.48
UBP9YER098W YMR102CQ03177 834 aa5.82□□□□□ -1.48
UBP9YER098W RSC3Q06639 885 aa5.82□□□□□ -1.48
UBP9YER098W YTM1Q12024 460 aaPredicted RBP5.82□□□□□ -1.48
UBP9YER098W SNT2P53127 1403 aa5.82□□□□□ -1.48
UBP9YER098W DAL3P32459 195 aa5.82□□□□□ -1.48
UBP9YER098W MRS6P32864 603 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W YBR238CP38330 731 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W PCM1P38628 557 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W NOC2P39744 710 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W MXR1P40029 184 aa5.82□□□□□ -1.48
UBP9YER098W CAF16P43569 289 aa5.82□□□□□ -1.48
UBP9YER098W DUG1P43616 481 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W GCV1P48015 400 aa5.82□□□□□ -1.48
UBP9YER098W ENT2Q05785 613 aa5.82□□□□□ -1.48
UBP9YER098W LAP2Q10740 671 aa5.82□□□□□ -1.48
UBP9YER098W ALG6Q12001 544 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W ROM2P51862 1356 aaKnown RBP5.82□□□□□ -1.48
UBP9YER098W NPP1P25353 742 aa5.81□□□□□ -1.48
UBP9YER098W PTP2P29461 750 aa5.81□□□□□ -1.48
UBP9YER098W STO1P34160 861 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W CAT8P39113 1433 aa5.81□□□□□ -1.48
UBP9YER098W NIT2P47016 307 aa5.81□□□□□ -1.48
UBP9YER098W NPA3P47122 385 aa5.81□□□□□ -1.48
UBP9YER098W AIM14P53109 570 aa5.81□□□□□ -1.48
UBP9YER098W NNF2P53253 936 aa5.81□□□□□ -1.48
UBP9YER098W YGR283CP53336 341 aaPredicted RBP5.81□□□□□ -1.48
UBP9YER098W TIM50Q02776 476 aa5.81□□□□□ -1.48
UBP9YER098W GRX3Q03835 250 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-HO13535 1793 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-DR5P0C2I2 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-DR6P0C2I3 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-LR2P0C2I5 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-LR3P0C2I6 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W TY1B-PR1P0C2I9 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W TY1B-PR2P0C2J0 1756 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-PR3P0C2J1 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W TY1B-JR1P47098 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-ML2Q03434 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W TY1B-ER1Q03612 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-ML1Q04711 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W TY1B-GR2Q12269 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-OLQ12273 1755 aa5.81□□□□□ -1.48
UBP9YER098W TY1B-PLQ12414 1755 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W MET5P47169 1442 aa5.81□□□□□ -1.48
UBP9YER098W CDC12P32468 407 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W REC104P33323 182 aa5.81□□□□□ -1.48
UBP9YER098W RRT14P40470 206 aa5.81□□□□□ -1.48
UBP9YER098W STU2P46675 888 aa5.81□□□□□ -1.48
UBP9YER098W SRP1Q02821 542 aaKnown RBP5.81□□□□□ -1.48
UBP9YER098W SNF2P22082 1703 aa5.8□□□□□ -1.48
UBP9YER098W SAP190P36123 1033 aa5.8□□□□□ -1.48
UBP9YER098W GZF3P42944 551 aaKnown RBP5.8□□□□□ -1.48
UBP9YER098W VPS53P47061 822 aa5.8□□□□□ -1.48
UBP9YER098W PBP1P53297 722 aaKnown RBP5.8□□□□□ -1.48
UBP9YER098W SOK2P53438 785 aaPredicted RBP5.8□□□□□ -1.48
UBP9YER098W NAM8Q00539 523 aaKnown RBP5.8□□□□□ -1.48
UBP9YER098W UBP2Q01476 1272 aa5.8□□□□□ -1.48
UBP9YER098W SPO21Q12411 609 aa5.8□□□□□ -1.48
UBP9YER098W BUD3P25558 1636 aa5.8□□□□□ -1.48
UBP9YER098W APA1P16550 321 aaKnown RBP5.79□□□□□ -1.48
UBP9YER098W MCD4P36051 919 aa5.79□□□□□ -1.48
UBP9YER098W BYE1P36106 594 aa5.79□□□□□ -1.48
UBP9YER098W DID4P36108 232 aa5.79□□□□□ -1.48
UBP9YER098W EXO84P38261 753 aa5.79□□□□□ -1.48
UBP9YER098W GPP2P40106 250 aaKnown RBP5.79□□□□□ -1.48
UBP9YER098W RSC8P43609 557 aaKnown RBP5.79□□□□□ -1.48
UBP9YER098W ARP5P53946 755 aa5.79□□□□□ -1.48
UBP9YER098W ATG33Q06485 197 aa5.79□□□□□ -1.48
UBP9YER098W YPL260WQ08977 551 aa5.79□□□□□ -1.48
UBP9YER098W RAD9P14737 1309 aa5.79□□□□□ -1.48
UBP9YER098W HSP82P02829 709 aaKnown RBP5.79□□□□□ -1.48
UBP9YER098W HMG1P12683 1054 aa5.79□□□□□ -1.48
UBP9YER098W PER1P25625 357 aa5.79□□□□□ -1.48
UBP9YER098W RIM4P38741 713 aa5.79□□□□□ -1.48
UBP9YER098W RTR1P40084 226 aaPredicted RBP5.79□□□□□ -1.48
UBP9YER098W SSL2Q00578 843 aa5.79□□□□□ -1.48
UBP9YER098W VPS20Q04272 221 aa5.79□□□□□ -1.48
UBP9YER098W SML1Q04964 104 aa5.79□□□□□ -1.48
UBP9YER098W MET7Q08645 548 aa5.79□□□□□ -1.48
UBP9YER098W RRP6Q12149 733 aaKnown RBP5.79□□□□□ -1.48
UBP9YER098W FPS1P23900 669 aa5.78□□□□□ -1.48
UBP9YER098W HOG1P32485 435 aa5.78□□□□□ -1.48
UBP9YER098W GPB2P39717 880 aa5.78□□□□□ -1.48
UBP9YER098W LEM3P42838 414 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms