RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C TOM20P35180 183 aa4.26□□□□□ -1.73
CDC40YDR364C TYS1P36421 394 aaKnown RBP4.26□□□□□ -1.73
CDC40YDR364C CHA4P43634 648 aa4.26□□□□□ -1.73
CDC40YDR364C EXG2P52911 562 aa4.26□□□□□ -1.73
CDC40YDR364C POB3Q04636 552 aaKnown RBP4.26□□□□□ -1.73
CDC40YDR364C ADY3Q07732 790 aa4.26□□□□□ -1.73
CDC40YDR364C HIS5P07172 385 aa4.25□□□□□ -1.73
CDC40YDR364C ACE2P21192 770 aa4.25□□□□□ -1.73
CDC40YDR364C PBP2P38151 413 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CDC40YDR364C MND2P40577 368 aa4.25□□□□□ -1.73
CDC40YDR364C ATG36P46983 293 aa4.25□□□□□ -1.73
CDC40YDR364C RPN4Q03465 531 aa4.25□□□□□ -1.73
CDC40YDR364C TPO1Q07824 586 aa4.25□□□□□ -1.73
CDC40YDR364C AIM39Q08223 395 aa4.25□□□□□ -1.73
CDC40YDR364C HRR25P29295 494 aaKnown RBP4.24□□□□□ -1.73
CDC40YDR364C HXT13P39924 564 aa4.24□□□□□ -1.73
CDC40YDR364C YGR122WP53272 402 aa4.24□□□□□ -1.73
CDC40YDR364C HXT17P53631 564 aa4.24□□□□□ -1.73
CDC40YDR364C HXT15P54854 567 aa4.24□□□□□ -1.73
CDC40YDR364C MET6P05694 767 aaKnown RBP4.23□□□□□ -1.73
CDC40YDR364C CYC8P14922 966 aa4.23□□□□□ -1.73
CDC40YDR364C PFK1P16861 987 aaKnown RBP4.23□□□□□ -1.73
CDC40YDR364C BAS1P22035 811 aa4.23□□□□□ -1.73
CDC40YDR364C SYP1P25623 870 aaKnown RBP4.23□□□□□ -1.73
CDC40YDR364C MLS1P30952 554 aa4.23□□□□□ -1.73
CDC40YDR364C MNR2P35724 969 aa4.23□□□□□ -1.73
CDC40YDR364C RRT14P40470 206 aa4.23□□□□□ -1.73
CDC40YDR364C UBA2P52488 636 aa4.23□□□□□ -1.73
CDC40YDR364C UBX5Q06682 500 aa4.23□□□□□ -1.73
CDC40YDR364C MCD1Q12158 566 aa4.23□□□□□ -1.73
CDC40YDR364C YGR161W-CQ3E744 92 aa4.23□□□□□ -1.73
CDC40YDR364C HAP1P0CE41 1502 aa4.23□□□□□ -1.73
CDC40YDR364C SEC7P11075 2009 aaKnown RBP4.22□□□□□ -1.73
CDC40YDR364C RAD2P07276 1031 aa4.22□□□□□ -1.73
CDC40YDR364C PRI2P20457 528 aa4.22□□□□□ -1.73
CDC40YDR364C TAF5P38129 798 aa4.22□□□□□ -1.73
CDC40YDR364C CNN1P43618 361 aa4.22□□□□□ -1.73
CDC40YDR364C GDE1Q02979 1223 aa4.22□□□□□ -1.73
CDC40YDR364C BDF2Q07442 638 aa4.22□□□□□ -1.73
CDC40YDR364C DNF3Q12674 1656 aa4.21□□□□□ -1.73
CDC40YDR364C SSB1P11484 613 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C DBP5P20449 482 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C PRE9P23638 258 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C GRX1P25373 110 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C ESL2P36168 1195 aa4.21□□□□□ -1.74
CDC40YDR364C POA1P38218 177 aa4.21□□□□□ -1.74
CDC40YDR364C MNN1P39106 762 aa4.21□□□□□ -1.74
CDC40YDR364C SSB2P40150 613 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C MPH1P40562 993 aa4.21□□□□□ -1.74
CDC40YDR364C MRPS18P42847 217 aa4.21□□□□□ -1.74
CDC40YDR364C GNP1P48813 663 aa4.21□□□□□ -1.74
CDC40YDR364C HUL5P53119 910 aa4.21□□□□□ -1.74
CDC40YDR364C SUB1P54000 292 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C TY3B-IQ7LHG5 1498 aaKnown RBP4.21□□□□□ -1.74
CDC40YDR364C RPP2AP05319 106 aaKnown RBP4.2□□□□□ -1.74
CDC40YDR364C BUD6P41697 788 aa4.2□□□□□ -1.74
CDC40YDR364C TIM54P47045 478 aa4.2□□□□□ -1.74
CDC40YDR364C YLR419WQ06698 1435 aaKnown RBP4.2□□□□□ -1.74
CDC40YDR364C RAD9P14737 1309 aa4.19□□□□□ -1.74
CDC40YDR364C BCK1Q01389 1478 aa4.19□□□□□ -1.74
CDC40YDR364C RAD4P14736 754 aa4.19□□□□□ -1.74
CDC40YDR364C UGA2P38067 497 aa4.19□□□□□ -1.74
CDC40YDR364C GEM1P39722 662 aa4.19□□□□□ -1.74
CDC40YDR364C NUP82P40368 713 aa4.19□□□□□ -1.74
CDC40YDR364C HFM1P51979 1187 aa4.19□□□□□ -1.74
CDC40YDR364C MAK10Q02197 733 aa4.19□□□□□ -1.74
CDC40YDR364C TDA5Q06417 326 aaKnown RBP4.19□□□□□ -1.74
CDC40YDR364C ACM1Q08981 209 aa4.19□□□□□ -1.74
CDC40YDR364C KRE5P22023 1365 aa4.19□□□□□ -1.74
CDC40YDR364C MHP1P43638 1398 aa4.19□□□□□ -1.74
CDC40YDR364C BI4P03879 638 aa4.18□□□□□ -1.74
CDC40YDR364C ZRG8P40021 1076 aa4.18□□□□□ -1.74
CDC40YDR364C SNM1P40993 198 aa4.18□□□□□ -1.74
CDC40YDR364C YJR142WP47173 342 aa4.18□□□□□ -1.74
CDC40YDR364C FAA4P47912 694 aaKnown RBP4.18□□□□□ -1.74
CDC40YDR364C NAN1Q02931 896 aaKnown RBP4.18□□□□□ -1.74
CDC40YDR364C ENB1Q08299 606 aa4.18□□□□□ -1.74
CDC40YDR364C KCS1Q12494 1050 aa4.18□□□□□ -1.74
CDC40YDR364C THS1P04801 734 aaKnown RBP4.17□□□□□ -1.74
CDC40YDR364C MXR1P40029 184 aa4.17□□□□□ -1.74
CDC40YDR364C ATF1P40353 525 aa4.17□□□□□ -1.74
CDC40YDR364C QRI1P43123 477 aaKnown RBP4.17□□□□□ -1.74
CDC40YDR364C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
CDC40YDR364C TAF8Q03750 510 aa4.17□□□□□ -1.74
CDC40YDR364C NUP192P47054 1683 aa4.17□□□□□ -1.74
CDC40YDR364C SEC3P33332 1336 aaKnown RBP4.17□□□□□ -1.74
CDC40YDR364C RPL11AP0C0W9 174 aaKnown RBP4.16□□□□□ -1.74
CDC40YDR364C PHO8P11491 566 aa4.16□□□□□ -1.74
CDC40YDR364C SPE2P21182 396 aa4.16□□□□□ -1.74
CDC40YDR364C DBP2P24783 546 aaKnown RBP4.16□□□□□ -1.74
CDC40YDR364C GRX4P32642 244 aa4.16□□□□□ -1.74
CDC40YDR364C SCT1P32784 759 aa4.16□□□□□ -1.74
CDC40YDR364C TIM23P32897 222 aa4.16□□□□□ -1.74
CDC40YDR364C SLA2P33338 968 aa4.16□□□□□ -1.74
CDC40YDR364C VPS72Q03388 795 aa4.16□□□□□ -1.74
CDC40YDR364C UTP14Q04500 899 aaKnown RBP4.16□□□□□ -1.74
CDC40YDR364C GNT1Q12096 491 aa4.16□□□□□ -1.74
CDC40YDR364C FAL1Q12099 399 aaKnown RBP4.16□□□□□ -1.74
CDC40YDR364C RPL11BQ3E757 174 aaPredicted RBP4.16□□□□□ -1.74
CDC40YDR364C CFT1Q06632 1357 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms