RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA2	YDR295C	GCD1	P09032	578 aa	Predicted RBP	4.12	□□□□□ -1.75
HDA2	YDR295C	EMC3	P36039	253 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	YKR078W	P36158	585 aa	Known RBP	4.12	□□□□□ -1.75
HDA2	YDR295C	DAS1	P47005	663 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	CCM1	P48237	864 aa	Predicted RBP	4.12	□□□□□ -1.75
HDA2	YDR295C	GPG1	P53130	126 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
HDA2	YDR295C	TRE1	Q08919	783 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	SVS1	Q12254	260 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	TMA17	Q12513	150 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	FUN30	P31380	1131 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	MUM2	P38236	366 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	RRT14	P40470	206 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	YPL034W	Q03083	165 aa		4.12	□□□□□ -1.75
HDA2	YDR295C	FOB1	O13329	566 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	PCL2	P25693	308 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	CDC48	P25694	835 aa	Known RBP	4.11	□□□□□ -1.75
HDA2	YDR295C	HIR1	P32479	840 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	AIM26	P32858	118 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	PTC7	P38797	343 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	GTS1	P40956	396 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	ATP25	Q03153	612 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	RSC3	Q06639	885 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	YOR059C	Q08448	450 aa	Known RBP	4.11	□□□□□ -1.75
HDA2	YDR295C	MET7	Q08645	548 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	VPS5	Q92331	675 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	RAD18	P10862	487 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	HSC82	P15108	705 aa	Known RBP	4.11	□□□□□ -1.75
HDA2	YDR295C	MCD4	P36051	919 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	YAP1801	P38856	637 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	YJR120W	P47157	116 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	HLJ1	P48353	224 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	SSY1	Q03770	852 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	SND1	Q04007	877 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	THI73	Q07904	523 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	PHM7	Q12252	991 aa		4.11	□□□□□ -1.75
HDA2	YDR295C	CHS2	P14180	963 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	GSY1	P23337	708 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	PER1	P25625	357 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	COQ2	P32378	372 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	SWI3	P32591	825 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	MGS1	P40151	587 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	TGL2	P54857	326 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	NBA1	Q08229	501 aa	Known RBP	4.1	□□□□□ -1.75
HDA2	YDR295C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	NYV1	Q12255	253 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	RTP1	Q12751	981 aa		4.1	□□□□□ -1.75
HDA2	YDR295C	MSB1	P21339	1137 aa	Known RBP	4.09	□□□□□ -1.75
HDA2	YDR295C	YKL222C	P35995	705 aa		4.09	□□□□□ -1.75
HDA2	YDR295C	ECM21	P38167	1117 aa	Known RBP	4.09	□□□□□ -1.75
HDA2	YDR295C	HXT16	P47185	567 aa		4.09	□□□□□ -1.75
HDA2	YDR295C	SDA1	P53313	767 aa	Known RBP	4.09	□□□□□ -1.75
HDA2	YDR295C	LPX1	Q12405	387 aa	Known RBP	4.09	□□□□□ -1.75
HDA2	YDR295C	PGI1	P12709	554 aa	Known RBP	4.09	□□□□□ -1.76
HDA2	YDR295C	TFC3	P34111	1160 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	NIT1	P40447	199 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	GPP1	P41277	250 aa	Known RBP	4.09	□□□□□ -1.76
HDA2	YDR295C	CAF16	P43569	289 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	YGR237C	P50089	785 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	MET13	P53128	600 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	YGR130C	P53278	816 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	YPR196W	Q06595	470 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	OSW2	Q12202	724 aa		4.09	□□□□□ -1.76
HDA2	YDR295C	NUP145	P49687	1317 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	MIH1	P23748	554 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	YCL002C	P25565	263 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	ICP55	P40051	511 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	DAM1	P53267	343 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	UBX4	P54730	416 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	UME1	Q03010	460 aa		4.08	□□□□□ -1.76
HDA2	YDR295C	LRS4	Q04087	347 aa	Known RBP	4.08	□□□□□ -1.76
HDA2	YDR295C	TRP3	P00937	484 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	SFL1	P20134	766 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	KAE1	P36132	386 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	RFC5	P38251	354 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	PMT3	P47190	753 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	TAD1	P53065	400 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	HDA1	P53973	706 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	YEF3	P16521	1044 aa	Known RBP	4.07	□□□□□ -1.76
HDA2	YDR295C	DAL7	P21826	554 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	STO1	P34160	861 aa	Known RBP	4.07	□□□□□ -1.76
HDA2	YDR295C	PCM1	P38628	557 aa	Known RBP	4.07	□□□□□ -1.76
HDA2	YDR295C	PES4	P39684	611 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	AIM14	P53109	570 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	ALO1	P54783	526 aa	Known RBP	4.07	□□□□□ -1.76
HDA2	YDR295C	TLG1	Q03322	224 aa		4.07	□□□□□ -1.76
HDA2	YDR295C	INH1	P01097	85 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	NOT3	P06102	836 aa	Known RBP	4.06	□□□□□ -1.76
HDA2	YDR295C	SST2	P11972	698 aa	Known RBP	4.06	□□□□□ -1.76
HDA2	YDR295C	HMG1	P12683	1054 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	APL1	P27351	700 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	URA1	P28272	314 aa	Predicted RBP	4.06	□□□□□ -1.76
HDA2	YDR295C	SCT1	P32784	759 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	SRP101	P32916	621 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	YKR073C	P36153	106 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	JNM1	P36224	373 aa		4.06	□□□□□ -1.76
HDA2	YDR295C	TYS1	P36421	394 aa	Known RBP	4.06	□□□□□ -1.76
HDA2	YDR295C	PEA2	P40091	420 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms