RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C TVP38P36164 337 aa5.16□□□□□ -1.58
RPN6YDL097C POL12P38121 705 aaPredicted RBP5.16□□□□□ -1.58
RPN6YDL097C UBX7P38349 436 aa5.16□□□□□ -1.58
RPN6YDL097C HMF1P40037 129 aaKnown RBP5.16□□□□□ -1.58
RPN6YDL097C SLX8P40072 274 aa5.16□□□□□ -1.58
RPN6YDL097C AAD14P42884 376 aa5.16□□□□□ -1.58
RPN6YDL097C HUL5P53119 910 aa5.16□□□□□ -1.58
RPN6YDL097C FOL1P53848 824 aa5.16□□□□□ -1.58
RPN6YDL097C VPS30Q02948 557 aa5.16□□□□□ -1.58
RPN6YDL097C JIP5Q06214 492 aaPredicted RBP5.16□□□□□ -1.58
RPN6YDL097C CDC53Q12018 815 aaKnown RBP5.16□□□□□ -1.58
RPN6YDL097C SEC15P22224 910 aa5.15□□□□□ -1.59
RPN6YDL097C ESS1P22696 170 aa5.15□□□□□ -1.59
RPN6YDL097C TCD2P36101 447 aaKnown RBP5.15□□□□□ -1.59
RPN6YDL097C UTH1P36135 365 aa5.15□□□□□ -1.59
RPN6YDL097C SSF1P38789 453 aaPredicted RBP5.15□□□□□ -1.59
RPN6YDL097C CRP1P38845 465 aaKnown RBP5.15□□□□□ -1.59
RPN6YDL097C GYP8P43570 497 aa5.15□□□□□ -1.59
RPN6YDL097C ROG3P43602 733 aa5.15□□□□□ -1.59
RPN6YDL097C ALT1P52893 592 aa5.15□□□□□ -1.59
RPN6YDL097C MDR1P53258 950 aa5.15□□□□□ -1.59
RPN6YDL097C YMR206WQ03695 313 aa5.15□□□□□ -1.59
RPN6YDL097C YML083CQ04526 418 aa5.15□□□□□ -1.59
RPN6YDL097C WHI4Q07655 649 aaKnown RBP5.15□□□□□ -1.59
RPN6YDL097C FMP25Q08023 583 aa5.15□□□□□ -1.59
RPN6YDL097C MPD2Q99316 277 aa5.15□□□□□ -1.59
RPN6YDL097C SCJ1P25303 377 aa5.14□□□□□ -1.59
RPN6YDL097C MDJ1P35191 511 aa5.14□□□□□ -1.59
RPN6YDL097C NEM1P38757 446 aa5.14□□□□□ -1.59
RPN6YDL097C SLN1P39928 1220 aaPredicted RBP5.14□□□□□ -1.59
RPN6YDL097C YEL025CP39991 1188 aa5.14□□□□□ -1.59
RPN6YDL097C DUG1P43616 481 aaKnown RBP5.14□□□□□ -1.59
RPN6YDL097C LSB1P53281 241 aa5.14□□□□□ -1.59
RPN6YDL097C SPO1P53541 631 aa5.14□□□□□ -1.59
RPN6YDL097C KRE33P53914 1056 aaKnown RBP5.14□□□□□ -1.59
RPN6YDL097C SVF1Q05515 481 aa5.14□□□□□ -1.59
RPN6YDL097C CHO2P05374 869 aaKnown RBP5.13□□□□□ -1.59
RPN6YDL097C MAS1P10507 462 aa5.13□□□□□ -1.59
RPN6YDL097C DAL5P15365 543 aa5.13□□□□□ -1.59
RPN6YDL097C TRM1P15565 570 aaKnown RBP5.13□□□□□ -1.59
RPN6YDL097C PDE1P22434 369 aa5.13□□□□□ -1.59
RPN6YDL097C PRO3P32263 286 aaKnown RBP5.13□□□□□ -1.59
RPN6YDL097C TTI1P36097 1038 aa5.13□□□□□ -1.59
RPN6YDL097C YBR238CP38330 731 aaKnown RBP5.13□□□□□ -1.59
RPN6YDL097C YJR098CP47139 656 aa5.13□□□□□ -1.59
RPN6YDL097C YGL081WP53156 320 aa5.13□□□□□ -1.59
RPN6YDL097C YNL108CP53929 270 aa5.13□□□□□ -1.59
RPN6YDL097C PKH2Q12236 1081 aaKnown RBP5.13□□□□□ -1.59
RPN6YDL097C BRR2P32639 2163 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C NUC1P08466 329 aa5.12□□□□□ -1.59
RPN6YDL097C DBP2P24783 546 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C PGS1P25578 521 aa5.12□□□□□ -1.59
RPN6YDL097C YJU3P28321 313 aa5.12□□□□□ -1.59
RPN6YDL097C CSE1P33307 960 aa5.12□□□□□ -1.59
RPN6YDL097C WBP1P33767 430 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C GIP1P38229 639 aa5.12□□□□□ -1.59
RPN6YDL097C CHS7P38843 316 aa5.12□□□□□ -1.59
RPN6YDL097C YMR147WP40218 223 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C ACF4P47129 309 aa5.12□□□□□ -1.59
RPN6YDL097C PIB2P53191 635 aa5.12□□□□□ -1.59
RPN6YDL097C IMP4P53941 290 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C HRP1Q99383 534 aaKnown RBP5.12□□□□□ -1.59
RPN6YDL097C STE4P18851 423 aa5.11□□□□□ -1.59
RPN6YDL097C ADE2P21264 571 aaKnown RBP5.11□□□□□ -1.59
RPN6YDL097C TFB1P32776 642 aa5.11□□□□□ -1.59
RPN6YDL097C CSM2P40465 213 aa5.11□□□□□ -1.59
RPN6YDL097C YPP1P46951 817 aa5.11□□□□□ -1.59
RPN6YDL097C ENP2P48234 707 aaKnown RBP5.11□□□□□ -1.59
RPN6YDL097C TY1A-MR1Q04215 440 aa5.11□□□□□ -1.59
RPN6YDL097C ESC8Q08119 714 aa5.11□□□□□ -1.59
RPN6YDL097C PLP2Q12017 286 aa5.11□□□□□ -1.59
RPN6YDL097C BI4P03879 638 aa5.1□□□□□ -1.59
RPN6YDL097C SIR1P21691 654 aa5.1□□□□□ -1.59
RPN6YDL097C UGA4P32837 571 aa5.1□□□□□ -1.59
RPN6YDL097C OSH7P38755 437 aa5.1□□□□□ -1.59
RPN6YDL097C YAP1801P38856 637 aa5.1□□□□□ -1.59
RPN6YDL097C ENT3P47160 408 aa5.1□□□□□ -1.59
RPN6YDL097C GDE1Q02979 1223 aa5.1□□□□□ -1.59
RPN6YDL097C YOR022CQ12204 715 aa5.1□□□□□ -1.59
RPN6YDL097C ATP1P07251 545 aaKnown RBP5.09□□□□□ -1.59
RPN6YDL097C RAD2P07276 1031 aa5.09□□□□□ -1.59
RPN6YDL097C SUP45P12385 437 aaKnown RBP5.09□□□□□ -1.59
RPN6YDL097C TEC1P18412 486 aa5.09□□□□□ -1.59
RPN6YDL097C PTP1P25044 335 aa5.09□□□□□ -1.59
RPN6YDL097C RRP8P38961 392 aaKnown RBP5.09□□□□□ -1.59
RPN6YDL097C UME6P39001 836 aa5.09□□□□□ -1.59
RPN6YDL097C VID28P40547 921 aa5.09□□□□□ -1.59
RPN6YDL097C NUT1P53114 1132 aa5.09□□□□□ -1.59
RPN6YDL097C NMA2P53204 395 aa5.09□□□□□ -1.59
RPN6YDL097C NRD1P53617 575 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
RPN6YDL097C CSI1Q04368 295 aa5.09□□□□□ -1.59
RPN6YDL097C RPL43AP0CX25 92 aaKnown RBP5.08□□□□□ -1.6
RPN6YDL097C RPL43BP0CX26 92 aa5.08□□□□□ -1.6
RPN6YDL097C NAR1P23503 491 aaKnown RBP5.08□□□□□ -1.6
RPN6YDL097C SPT5P27692 1063 aaKnown RBP5.08□□□□□ -1.6
RPN6YDL097C KIP1P28742 1111 aa5.08□□□□□ -1.6
RPN6YDL097C RPL8BP29453 256 aaKnown RBP5.08□□□□□ -1.6
RPN6YDL097C DUG2P38149 878 aa5.08□□□□□ -1.6
RPN6YDL097C PTI1P39927 425 aaPredicted RBP5.08□□□□□ -1.6
RPN6YDL097C CHS6P40955 746 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms