RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 FOXO4P98177 505 aa21.79■■□□□ 1.08
PHGDH-232ENST00000641947 BCL11BQ9C0K0 894 aaPredicted RBP21.79■■□□□ 1.08
PHGDH-232ENST00000641947 C4AP0C0L4 1744 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 UBN2Q6ZU65 1347 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 CAMTA2O94983 1202 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 GSPT1P15170 499 aaKnown RBP21.78■■□□□ 1.08
PHGDH-232ENST00000641947 RFX5P48382 616 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-232ENST00000641947 SMIM5Q71RC9 77 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 NLRP10Q86W26 655 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 KLHDC4Q8TBB5 520 aa21.78■■□□□ 1.08
PHGDH-232ENST00000641947 IL1RAPL2Q9NP60 686 aa21.77■■□□□ 1.08
PHGDH-232ENST00000641947 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-232ENST00000641947 RGS17Q9UGC6 210 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-232ENST00000641947 CCNL1Q9UK58 526 aaPredicted RBP21.77■■□□□ 1.08
PHGDH-232ENST00000641947 RAB11FIP3O75154 756 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 SEC24BO95487 1268 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 BMP2KLQ5H9B9 411 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 RHPN1Q8TCX5 695 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 CASZ1Q86V15 1759 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 FAM196AQ6ZSG2 479 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 ZNF34Q8IZ26 560 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 SYNE4Q8N205 404 aa21.76■■□□□ 1.07
PHGDH-232ENST00000641947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.76■■□□□ 1.07
PHGDH-232ENST00000641947 DDX60Q8IY21 1712 aaKnown RBP21.75■■□□□ 1.07
PHGDH-232ENST00000641947 HSP90AB3PQ58FF7 597 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 LMBR1LQ6UX01 489 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 AMIGO3Q86WK7 504 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 FAM89AQ96GI7 184 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
PHGDH-232ENST00000641947 PCCAP05165 728 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-232ENST00000641947 TTC22Q5TAA0 569 aa21.74■■□□□ 1.07
PHGDH-232ENST00000641947 NPM2Q86SE8 214 aaKnown RBP21.74■■□□□ 1.07
PHGDH-232ENST00000641947 LAMB2P55268 1798 aa21.74■■□□□ 1.07
PHGDH-232ENST00000641947 TSHZ3Q63HK5 1081 aa21.74■■□□□ 1.07
PHGDH-232ENST00000641947 KIF1BPQ96EK5 621 aa21.74■■□□□ 1.07
PHGDH-232ENST00000641947 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
PHGDH-232ENST00000641947 TRIM37O94972 964 aa21.73■■□□□ 1.07
PHGDH-232ENST00000641947 PTPN12Q05209 780 aaKnown RBP21.73■■□□□ 1.07
PHGDH-232ENST00000641947 RC3H1Q5TC82 1133 aaKnown RBP21.73■■□□□ 1.07
PHGDH-232ENST00000641947 ZBTB38Q8NAP3 1195 aaPredicted RBP21.73■■□□□ 1.07
PHGDH-232ENST00000641947 SIL1Q9H173 461 aa21.73■■□□□ 1.07
PHGDH-232ENST00000641947 SASH1O94885 1247 aa21.72■■□□□ 1.07
PHGDH-232ENST00000641947 PDE1AP54750 535 aa21.72■■□□□ 1.07
PHGDH-232ENST00000641947 AK9Q5TCS8 1911 aa21.72■■□□□ 1.07
PHGDH-232ENST00000641947 HSP90AB4PQ58FF6 505 aa21.71■■□□□ 1.07
PHGDH-232ENST00000641947 OSBPL3Q9H4L5 887 aa21.71■■□□□ 1.07
PHGDH-232ENST00000641947 COPRSQ9NQ92 184 aa21.71■■□□□ 1.07
PHGDH-232ENST00000641947 OS9Q13438 667 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-232ENST00000641947 NUTM1Q86Y26 1132 aa21.71■■□□□ 1.07
PHGDH-232ENST00000641947 TNS1Q9HBL0 1735 aaKnown RBP21.7■■□□□ 1.07
PHGDH-232ENST00000641947 CDHR2Q9BYE9 1310 aa21.7■■□□□ 1.06
PHGDH-232ENST00000641947 MX1P20591 662 aa21.7■■□□□ 1.06
PHGDH-232ENST00000641947 PLA2G12BQ9BX93 195 aa21.7■■□□□ 1.06
PHGDH-232ENST00000641947 COL24A1Q17RW2 1714 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 GNPATO15228 680 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 RXRBP28702 533 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 POTEAQ6S8J7 498 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 RPS6KA4O75676 772 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 SUSD4Q5VX71 490 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 STAP2Q9UGK3 403 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 CHMP3Q9Y3E7 222 aa21.69■■□□□ 1.06
PHGDH-232ENST00000641947 BCL2L12Q9HB09 334 aa21.68■■□□□ 1.06
PHGDH-232ENST00000641947 G3BP1Q13283 466 aaKnown RBP eCLIP21.67■■□□□ 1.069e-7■■■□□ 18.4
PHGDH-232ENST00000641947 ERC1Q8IUD2 1116 aa21.67■■□□□ 1.06
PHGDH-232ENST00000641947 TRMT112Q9UI30 125 aaKnown RBP21.67■■□□□ 1.06
PHGDH-232ENST00000641947 CSF1RP07333 972 aa21.66■■□□□ 1.06
PHGDH-232ENST00000641947 ZNF594Q96JF6 807 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-232ENST00000641947 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
PHGDH-232ENST00000641947 IRS4O14654 1257 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-232ENST00000641947 SDSP20132 328 aa21.65■■□□□ 1.06
PHGDH-232ENST00000641947 CCDC85AQ96PX6 553 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-232ENST00000641947 NIP7Q9Y221 180 aaKnown RBP eCLIP21.65■■□□□ 1.06
PHGDH-232ENST00000641947 SPEF2Q9C093 1822 aa21.65■■□□□ 1.06
PHGDH-232ENST00000641947 FAM177BA6PVY3 158 aa21.64■■□□□ 1.06
PHGDH-232ENST00000641947 NTSR2O95665 410 aa21.64■■□□□ 1.06
PHGDH-232ENST00000641947 USPL1Q5W0Q7 1092 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 CLEC4GQ6UXB4 293 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 TBC1D9Q6ZT07 1266 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 ATG9AQ7Z3C6 839 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 PROM2Q8N271 834 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 PI4K2BQ8TCG2 481 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 EAF2Q96CJ1 260 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-232ENST00000641947 NARFQ9UHQ1 456 aa21.64■■□□□ 1.05
PHGDH-232ENST00000641947 USP42Q9H9J4 1324 aaKnown RBP21.63■■□□□ 1.05
PHGDH-232ENST00000641947 CLASRPQ8N2M8 674 aaKnown RBP21.63■■□□□ 1.05
PHGDH-232ENST00000641947 TTLL11Q8NHH1 800 aa21.63■■□□□ 1.05
PHGDH-232ENST00000641947 ARHGEF1Q92888 912 aaKnown RBP21.63■■□□□ 1.05
PHGDH-232ENST00000641947 RTCBQ9Y3I0 505 aaKnown RBP21.63■■□□□ 1.05
PHGDH-232ENST00000641947 AOX1Q06278 1338 aa21.63■■□□□ 1.05
PHGDH-232ENST00000641947 CTSWP56202 376 aa21.62■■□□□ 1.05
PHGDH-232ENST00000641947 PARP10Q53GL7 1025 aa21.62■■□□□ 1.05
PHGDH-232ENST00000641947 TLR7Q9NYK1 1049 aaKnown RBP21.62■■□□□ 1.05
PHGDH-232ENST00000641947 ZNF652Q9Y2D9 606 aa21.62■■□□□ 1.05
PHGDH-232ENST00000641947 LRP5O75197 1615 aa21.62■■□□□ 1.05
PHGDH-232ENST00000641947 COL4A1P02462 1669 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 TFCP2Q12800 502 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 AACSQ86V21 672 aa21.61■■□□□ 1.05
PHGDH-232ENST00000641947 UTP14AQ9BVJ6 771 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms