RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 STYK1Q6J9G0 422 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 G2E3Q7L622 706 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 SYNE4Q8N205 404 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
PHGDH-227ENST00000641811 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
PHGDH-227ENST00000641811 ISCA1Q9BUE6 129 aa22.27■■□□□ 1.16
PHGDH-227ENST00000641811 NPR1P16066 1061 aa22.26■■□□□ 1.15
PHGDH-227ENST00000641811 C3orf67Q6ZVT6 689 aa22.26■■□□□ 1.15
PHGDH-227ENST00000641811 TRMT112Q9UI30 125 aaKnown RBP22.26■■□□□ 1.15
PHGDH-227ENST00000641811 ARFGEF2Q9Y6D5 1785 aa22.25■■□□□ 1.15
PHGDH-227ENST00000641811 C21orf2O43822 256 aa22.25■■□□□ 1.15
PHGDH-227ENST00000641811 PRPF40BQ6NWY9 871 aaKnown RBP22.25■■□□□ 1.15
PHGDH-227ENST00000641811 ZNF784Q8NCA9 323 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-227ENST00000641811 CNKSR1Q969H4 720 aa22.25■■□□□ 1.15
PHGDH-227ENST00000641811 CDCA7LQ96GN5 454 aa22.24■■□□□ 1.15
PHGDH-227ENST00000641811 MYD88Q99836 296 aa22.24■■□□□ 1.15
PHGDH-227ENST00000641811 SLX4Q8IY92 1834 aa22.24■■□□□ 1.15
PHGDH-227ENST00000641811 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
PHGDH-227ENST00000641811 HCLS1P14317 486 aaPredicted RBP22.23■■□□□ 1.15
PHGDH-227ENST00000641811 RASSF7Q02833 373 aa22.23■■□□□ 1.15
PHGDH-227ENST00000641811 CRY2Q49AN0 593 aa22.23■■□□□ 1.15
PHGDH-227ENST00000641811 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
PHGDH-227ENST00000641811 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
PHGDH-227ENST00000641811 PI4KAP2A4QPH2 592 aa22.22■■□□□ 1.15
PHGDH-227ENST00000641811 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
PHGDH-227ENST00000641811 PI4KAP1Q8N8J0 262 aa22.22■■□□□ 1.15
PHGDH-227ENST00000641811 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
PHGDH-227ENST00000641811 CACNA1SQ13698 1873 aa22.22■■□□□ 1.15
PHGDH-227ENST00000641811 E9PSI1 815 aa22.21■■□□□ 1.15
PHGDH-227ENST00000641811 TRIM28Q13263 835 aaKnown RBP22.21■■□□□ 1.15
PHGDH-227ENST00000641811 RTL5Q5HYW3 569 aaPredicted RBP22.21■■□□□ 1.15
PHGDH-227ENST00000641811 KSR2Q6VAB6 950 aa22.21■■□□□ 1.15
PHGDH-227ENST00000641811 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
PHGDH-227ENST00000641811 METTL22Q9BUU2 404 aaPredicted RBP22.21■■□□□ 1.15
PHGDH-227ENST00000641811 SH3TC1Q8TE82 1336 aa22.21■■□□□ 1.15
PHGDH-227ENST00000641811 ADCY9O60503 1353 aa22.21■■□□□ 1.15
PHGDH-227ENST00000641811 FLIIQ13045 1269 aa22.2■■□□□ 1.14
PHGDH-227ENST00000641811 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
PHGDH-227ENST00000641811 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
PHGDH-227ENST00000641811 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
PHGDH-227ENST00000641811 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.14
PHGDH-227ENST00000641811 NFKBIEO00221 500 aa22.19■■□□□ 1.14
PHGDH-227ENST00000641811 PRELPP51888 382 aa22.19■■□□□ 1.14
PHGDH-227ENST00000641811 OLFM4Q6UX06 510 aa22.19■■□□□ 1.14
PHGDH-227ENST00000641811 C7orf43Q8WVR3 580 aa22.19■■□□□ 1.14
PHGDH-227ENST00000641811 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
PHGDH-227ENST00000641811 HOXA10P31260 410 aaPredicted RBP22.18■■□□□ 1.14
PHGDH-227ENST00000641811 JARID2Q92833 1246 aaPredicted RBP22.17■■□□□ 1.14
PHGDH-227ENST00000641811 RNF181Q9P0P0 153 aa22.17■■□□□ 1.14
PHGDH-227ENST00000641811 IGKV5-2P06315 115 aa22.16■■□□□ 1.14
PHGDH-227ENST00000641811 FKBP5Q13451 457 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-227ENST00000641811 SLC51AQ86UW1 340 aa22.16■■□□□ 1.14
PHGDH-227ENST00000641811 ZNF526Q8TF50 670 aaPredicted RBP22.16■■□□□ 1.14
PHGDH-227ENST00000641811 RBM17Q96I25 401 aaKnown RBP22.16■■□□□ 1.14
PHGDH-227ENST00000641811 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
PHGDH-227ENST00000641811 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
PHGDH-227ENST00000641811 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
PHGDH-227ENST00000641811 LAMB2P55268 1798 aa22.15■■□□□ 1.14
PHGDH-227ENST00000641811 SBF1O95248 1867 aa22.14■■□□□ 1.13
PHGDH-227ENST00000641811 CWF19L2Q2TBE0 894 aaKnown RBP22.14■■□□□ 1.13
PHGDH-227ENST00000641811 ZBTB38Q8NAP3 1195 aaPredicted RBP22.14■■□□□ 1.13
PHGDH-227ENST00000641811 CRAMP1Q96RY5 1269 aa22.14■■□□□ 1.13
PHGDH-227ENST00000641811 IRS4O14654 1257 aaPredicted RBP22.13■■□□□ 1.13
PHGDH-227ENST00000641811 LMNB1P20700 586 aa22.13■■□□□ 1.13
PHGDH-227ENST00000641811 NEXNQ0ZGT2 675 aa22.13■■□□□ 1.13
PHGDH-227ENST00000641811 DDX60Q8IY21 1712 aaKnown RBP22.13■■□□□ 1.13
PHGDH-227ENST00000641811 ABCC4O15439 1325 aa22.12■■□□□ 1.13
PHGDH-227ENST00000641811 FER1L6Q2WGJ9 1857 aa22.12■■□□□ 1.13
PHGDH-227ENST00000641811 PCCAP05165 728 aaPredicted RBP22.12■■□□□ 1.13
PHGDH-227ENST00000641811 CCDC93Q567U6 631 aa22.12■■□□□ 1.13
PHGDH-227ENST00000641811 SOGA3Q5TF21 947 aa22.12■■□□□ 1.13
PHGDH-227ENST00000641811 DNAAF4Q8WXU2 420 aa22.12■■□□□ 1.13
PHGDH-227ENST00000641811 CACNA1FO60840 1977 aa22.11■■□□□ 1.13
PHGDH-227ENST00000641811 NEURL1BA8MQ27 555 aa22.11■■□□□ 1.13
PHGDH-227ENST00000641811 F6X3S4 739 aa22.11■■□□□ 1.13
PHGDH-227ENST00000641811 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
PHGDH-227ENST00000641811 TAOK3Q9H2K8 898 aa22.11■■□□□ 1.13
PHGDH-227ENST00000641811 PPEF1O14829 653 aaPredicted RBP22.1■■□□□ 1.13
PHGDH-227ENST00000641811 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
PHGDH-227ENST00000641811 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
PHGDH-227ENST00000641811 MRPL50Q8N5N7 158 aaKnown RBP22.09■■□□□ 1.13
PHGDH-227ENST00000641811 SSH1Q8WYL5 1049 aa22.09■■□□□ 1.13
PHGDH-227ENST00000641811 SF3B3Q15393 1217 aaKnown RBP22.08■■□□□ 1.13
PHGDH-227ENST00000641811 BCL2L13Q9BXK5 485 aa22.08■■□□□ 1.13
PHGDH-227ENST00000641811 CCDC88AQ3V6T2 1871 aa22.08■■□□□ 1.13
PHGDH-227ENST00000641811 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
PHGDH-227ENST00000641811 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
PHGDH-227ENST00000641811 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
PHGDH-227ENST00000641811 GPBP1L1Q9HC44 474 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-227ENST00000641811 TAF1P21675 1872 aa22.07■■□□□ 1.12
PHGDH-227ENST00000641811 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
PHGDH-227ENST00000641811 GRAPQ13588 217 aa22.06■■□□□ 1.12
PHGDH-227ENST00000641811 GCKRQ14397 625 aa22.06■■□□□ 1.12
PHGDH-227ENST00000641811 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-227ENST00000641811 ZNF277Q9NRM2 450 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-227ENST00000641811 COL4A1P02462 1669 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 H7C1W4 665 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 PDE8AO60658 829 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 BBOX1O75936 387 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms