RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 PTPRCP08575 1304 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
PHGDH-224ENST00000641711 NFIXQ14938 502 aa12.87□□□□□ -0.35
PHGDH-224ENST00000641711 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
PHGDH-224ENST00000641711 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
PHGDH-224ENST00000641711 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
PHGDH-224ENST00000641711 ARXQ96QS3 562 aa12.87□□□□□ -0.35
PHGDH-224ENST00000641711 SETDB2Q96T68 719 aa12.87□□□□□ -0.35
PHGDH-224ENST00000641711 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
PHGDH-224ENST00000641711 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-224ENST00000641711 LAMB2P55268 1798 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
PHGDH-224ENST00000641711 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
PHGDH-224ENST00000641711 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 PHAXQ9H814 394 aaKnown RBP12.86□□□□□ -0.35
PHGDH-224ENST00000641711 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
PHGDH-224ENST00000641711 DDR1Q08345 913 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 FKBP5Q13451 457 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-224ENST00000641711 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 HLFQ16534 295 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 TBC1D9BQ66K14 1250 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 RIC3Q7Z5B4 369 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 ZNF34Q8IZ26 560 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 ANP32EQ9BTT0 268 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-224ENST00000641711 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
PHGDH-224ENST00000641711 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
PHGDH-224ENST00000641711 ADCY9O60503 1353 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-224ENST00000641711 RGS3P49796 1198 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 NEXNQ0ZGT2 675 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 SMC5Q8IY18 1101 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-224ENST00000641711 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
PHGDH-224ENST00000641711 KIAA1551Q9HCM1 1747 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 SERPINB2P05120 415 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
PHGDH-224ENST00000641711 TPTE2Q6XPS3 522 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 CNBD1Q8NA66 436 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 ISCA1Q9BUE6 129 aa12.83□□□□□ -0.36
PHGDH-224ENST00000641711 BRCA1P38398 1863 aaKnown RBP12.82□□□□□ -0.36
PHGDH-224ENST00000641711 MYH3P11055 1940 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 ST5P78524 1137 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 G2E3Q7L622 706 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-224ENST00000641711 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
PHGDH-224ENST00000641711 UBN2Q6ZU65 1347 aa12.82□□□□□ -0.36
PHGDH-224ENST00000641711 TGFB2P61812 414 aa12.81□□□□□ -0.36
PHGDH-224ENST00000641711 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
PHGDH-224ENST00000641711 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
PHGDH-224ENST00000641711 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
PHGDH-224ENST00000641711 LINS1Q8NG48 757 aa12.81□□□□□ -0.36
PHGDH-224ENST00000641711 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
PHGDH-224ENST00000641711 NTSR2O95665 410 aa12.8□□□□□ -0.36
PHGDH-224ENST00000641711 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
PHGDH-224ENST00000641711 UTP14AQ9BVJ6 771 aaKnown RBP12.8□□□□□ -0.36
PHGDH-224ENST00000641711 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
PHGDH-224ENST00000641711 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
PHGDH-224ENST00000641711 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
PHGDH-224ENST00000641711 ARFGEF1Q9Y6D6 1849 aa12.79□□□□□ -0.36
PHGDH-224ENST00000641711 NPHP1O15259 732 aa12.79□□□□□ -0.36
PHGDH-224ENST00000641711 GPTP24298 496 aa12.79□□□□□ -0.36
PHGDH-224ENST00000641711 PDE6BP35913 854 aa12.79□□□□□ -0.36
PHGDH-224ENST00000641711 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
PHGDH-224ENST00000641711 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-224ENST00000641711 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-224ENST00000641711 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-224ENST00000641711 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-224ENST00000641711 SUSD4Q5VX71 490 aa12.78□□□□□ -0.36
PHGDH-224ENST00000641711 ERICH6Q7L0X2 663 aa12.78□□□□□ -0.36
PHGDH-224ENST00000641711 MYD88Q99836 296 aa12.78□□□□□ -0.36
PHGDH-224ENST00000641711 FHDC1Q9C0D6 1143 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-224ENST00000641711 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-224ENST00000641711 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
PHGDH-224ENST00000641711 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
PHGDH-224ENST00000641711 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-224ENST00000641711 NEURL1BA8MQ27 555 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
PHGDH-224ENST00000641711 SLC10A5Q5PT55 438 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 BEND3Q5T5X7 828 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-224ENST00000641711 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 TRMT112Q9UI30 125 aaKnown RBP12.77□□□□□ -0.37
PHGDH-224ENST00000641711 ABCC12Q96J65 1359 aa12.77□□□□□ -0.37
PHGDH-224ENST00000641711 NUCB1Q02818 461 aa12.76□□□□□ -0.37
PHGDH-224ENST00000641711 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms