RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 COL25A1Q9BXS0 654 aaPredicted RBP10.08□□□□□ -0.8
RTTN-217ENST00000640393 FGFR3P22607 806 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 ARSDP51689 593 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 SAMD5Q5TGI4 173 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 MARK1Q9P0L2 795 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 HCN2Q9UL51 889 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 ATXN7L1Q9ULK2 861 aaPredicted RBP10.07□□□□□ -0.8
RTTN-217ENST00000640393 KCNH4Q9UQ05 1017 aa10.07□□□□□ -0.8
RTTN-217ENST00000640393 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
RTTN-217ENST00000640393 INPP5BP32019 993 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 IER5Q5VY09 327 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 EDEM1Q92611 657 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 CNTNAP3BQ96NU0 1288 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 CNTNAP3Q9BZ76 1288 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 NDFIP2Q9NV92 336 aa10.06□□□□□ -0.8
RTTN-217ENST00000640393 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
RTTN-217ENST00000640393 MX2P20592 715 aa10.05□□□□□ -0.8
RTTN-217ENST00000640393 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
RTTN-217ENST00000640393 KRT25Q7Z3Z0 450 aa10.05□□□□□ -0.8
RTTN-217ENST00000640393 RAB44Q7Z6P3 723 aaPredicted RBP10.05□□□□□ -0.8
RTTN-217ENST00000640393 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
RTTN-217ENST00000640393 GAS6Q14393 721 aa10.04□□□□□ -0.8
RTTN-217ENST00000640393 ECM1Q16610 540 aa10.04□□□□□ -0.8
RTTN-217ENST00000640393 ALKBH2Q6NS38 261 aa10.04□□□□□ -0.8
RTTN-217ENST00000640393 PIK3R5Q8WYR1 880 aa10.04□□□□□ -0.8
RTTN-217ENST00000640393 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
RTTN-217ENST00000640393 EFSO43281 561 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 BMP4P12644 408 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 EPB42P16452 691 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 GMPRP36959 345 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
RTTN-217ENST00000640393 POLIQ9UNA4 740 aa10.03□□□□□ -0.8
RTTN-217ENST00000640393 NPR3P17342 541 aa10.02□□□□□ -0.8
RTTN-217ENST00000640393 GRNP28799 593 aaKnown RBP10.02□□□□□ -0.8
RTTN-217ENST00000640393 LCE2CQ5TA81 110 aa10.02□□□□□ -0.8
RTTN-217ENST00000640393 TTC16Q8NEE8 873 aa10.02□□□□□ -0.8
RTTN-217ENST00000640393 SLC30A3Q99726 388 aa10.02□□□□□ -0.8
RTTN-217ENST00000640393 A6NHS1 94 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 C2CD2LO14523 706 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 IGFLR1Q9H665 355 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 FZD6O60353 706 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 SASH3O75995 380 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 KRT76Q01546 638 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 BHMTQ93088 406 aa10.01□□□□□ -0.81
RTTN-217ENST00000640393 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
RTTN-217ENST00000640393 XYLBO75191 536 aa10□□□□□ -0.81
RTTN-217ENST00000640393 PDGFAP04085 211 aa10□□□□□ -0.81
RTTN-217ENST00000640393 TARSP26639 723 aaKnown RBP10□□□□□ -0.81
RTTN-217ENST00000640393 SPEM2Q0P670 501 aa10□□□□□ -0.81
RTTN-217ENST00000640393 PNMA5Q96PV4 448 aa10□□□□□ -0.81
RTTN-217ENST00000640393 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
RTTN-217ENST00000640393 PCSK2P16519 638 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 MAPK1P28482 360 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 MZF1P28698 734 aaPredicted RBP9.99□□□□□ -0.81
RTTN-217ENST00000640393 PCBP4P57723 403 aaKnown RBP9.99□□□□□ -0.81
RTTN-217ENST00000640393 LAMC2Q13753 1193 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 CCINQ13939 588 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 GSX2Q9BZM3 304 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 KCNMB2Q9Y691 235 aa9.99□□□□□ -0.81
RTTN-217ENST00000640393 IGF1RP08069 1367 aa9.98□□□□□ -0.81
RTTN-217ENST00000640393 KCNQ4P56696 695 aa9.98□□□□□ -0.81
RTTN-217ENST00000640393 TBC1D8BQ0IIM8 1120 aa9.98□□□□□ -0.81
RTTN-217ENST00000640393 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
RTTN-217ENST00000640393 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
RTTN-217ENST00000640393 NDUFB5O43674 189 aa9.97□□□□□ -0.81
RTTN-217ENST00000640393 TRIP4Q15650 581 aaPredicted RBP9.97□□□□□ -0.81
RTTN-217ENST00000640393 FNDC3AQ9Y2H6 1198 aaKnown RBP9.97□□□□□ -0.81
RTTN-217ENST00000640393 SYT9Q86SS6 491 aa9.96□□□□□ -0.82
RTTN-217ENST00000640393 NFKB1P19838 968 aa9.95□□□□□ -0.82
RTTN-217ENST00000640393 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
RTTN-217ENST00000640393 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.95□□□□□ -0.82
RTTN-217ENST00000640393 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
RTTN-217ENST00000640393 RARAP10276 462 aa9.94□□□□□ -0.82
RTTN-217ENST00000640393 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
RTTN-217ENST00000640393 ZNF438Q7Z4V0 828 aa9.94□□□□□ -0.82
RTTN-217ENST00000640393 NEURL1BA8MQ27 555 aa9.93□□□□□ -0.82
RTTN-217ENST00000640393 NEUROD1Q13562 356 aa9.93□□□□□ -0.82
RTTN-217ENST00000640393 ZFATQ9P243 1243 aa9.93□□□□□ -0.82
RTTN-217ENST00000640393 DCTN4Q9UJW0 460 aa9.93□□□□□ -0.82
RTTN-217ENST00000640393 MAP2K3P46734 347 aa9.92□□□□□ -0.82
RTTN-217ENST00000640393 TMCO4Q5TGY1 634 aa9.92□□□□□ -0.82
RTTN-217ENST00000640393 GGA1Q9UJY5 639 aa9.92□□□□□ -0.82
RTTN-217ENST00000640393 USP5P45974 858 aa9.91□□□□□ -0.82
RTTN-217ENST00000640393 SRSF11Q05519 484 aaKnown RBP9.91□□□□□ -0.82
RTTN-217ENST00000640393 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
RTTN-217ENST00000640393 NLRP13Q86W25 1043 aa9.91□□□□□ -0.82
RTTN-217ENST00000640393 ELP3Q9H9T3 547 aa9.91□□□□□ -0.82
RTTN-217ENST00000640393 TMEM63CQ9P1W3 806 aa9.91□□□□□ -0.82
RTTN-217ENST00000640393 KLF15Q9UIH9 416 aa9.91□□□□□ -0.82
RTTN-217ENST00000640393 RPLP1P05386 114 aaKnown RBP9.9□□□□□ -0.82
RTTN-217ENST00000640393 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms