RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 EYA1Q99502 592 aa24.31■■□□□ 1.48
PMS1-222ENST00000639501 DNAJC25Q9H1X3 360 aa24.31■■□□□ 1.48
PMS1-222ENST00000639501 CCDC112Q8NEF3 446 aa24.31■■□□□ 1.48
PMS1-222ENST00000639501 TDRD7Q8NHU6 1098 aaKnown RBP24.31■■□□□ 1.48
PMS1-222ENST00000639501 USP31Q70CQ4 1352 aa24.31■■□□□ 1.48
PMS1-222ENST00000639501 USP27XA6NNY8 438 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 ARID5BQ14865 1188 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 NR1I2O75469 434 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 NECTIN1Q15223 517 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 TPD52L1Q16890 204 aaPredicted RBP24.3■■□□□ 1.48
PMS1-222ENST00000639501 KCNB2Q92953 911 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 TM6SF1Q9BZW5 370 aa24.3■■□□□ 1.48
PMS1-222ENST00000639501 USP6P35125 1406 aa24.29■■□□□ 1.48
PMS1-222ENST00000639501 RBM43Q6ZSC3 357 aaKnown RBP24.29■■□□□ 1.48
PMS1-222ENST00000639501 ZNF592Q92610 1267 aa24.29■■□□□ 1.48
PMS1-222ENST00000639501 CGNQ9P2M7 1197 aaKnown RBP24.29■■□□□ 1.48
PMS1-222ENST00000639501 CLIP2Q9UDT6 1046 aa24.29■■□□□ 1.48
PMS1-222ENST00000639501 KIF18AQ8NI77 898 aa24.29■■□□□ 1.48
PMS1-222ENST00000639501 CLSTN2Q9H4D0 955 aa24.29■■□□□ 1.48
PMS1-222ENST00000639501 USP42Q9H9J4 1324 aaKnown RBP24.29■■□□□ 1.48
PMS1-222ENST00000639501 SLFN14P0C7P3 912 aa24.28■■□□□ 1.48
PMS1-222ENST00000639501 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
PMS1-222ENST00000639501 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
PMS1-222ENST00000639501 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
PMS1-222ENST00000639501 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.28■■□□□ 1.48
PMS1-222ENST00000639501 RBM8AQ9Y5S9 174 aaKnown RBP24.28■■□□□ 1.48
PMS1-222ENST00000639501 TAF6LQ9Y6J9 622 aa24.28■■□□□ 1.48
PMS1-222ENST00000639501 V9GYY5 206 aaPredicted RBP24.28■■□□□ 1.48
PMS1-222ENST00000639501 CCDC171Q6TFL3 1326 aa24.28■■□□□ 1.48
PMS1-222ENST00000639501 GLRX3O76003 335 aaKnown RBP24.27■■□□□ 1.48
PMS1-222ENST00000639501 ZNF165P49910 485 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 LEO1Q8WVC0 666 aaPredicted RBP24.27■■□□□ 1.48
PMS1-222ENST00000639501 PGBD1Q96JS3 809 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 IGSF1Q8N6C5 1336 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 HSPA2P54652 639 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 HDGFL1Q5TGJ6 251 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 CREB3L3Q68CJ9 461 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 LARP1Q6PKG0 1096 aaKnown RBP24.27■■□□□ 1.48
PMS1-222ENST00000639501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.27■■□□□ 1.48
PMS1-222ENST00000639501 IL17REQ8NFR9 667 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 PAXBP1Q9Y5B6 917 aa24.27■■□□□ 1.48
PMS1-222ENST00000639501 GABPB1Q06547 395 aaPredicted RBP24.26■■□□□ 1.47
PMS1-222ENST00000639501 MORC2Q9Y6X9 1032 aaPredicted RBP24.26■■□□□ 1.47
PMS1-222ENST00000639501 NPHP4O75161 1426 aaPredicted RBP24.26■■□□□ 1.47
PMS1-222ENST00000639501 TOPAZ1Q8N9V7 1692 aa24.26■■□□□ 1.47
PMS1-222ENST00000639501 CEP135Q66GS9 1140 aa24.26■■□□□ 1.47
PMS1-222ENST00000639501 FAM227BQ96M60 508 aa24.26■■□□□ 1.47
PMS1-222ENST00000639501 RUFY2Q8WXA3 655 aa24.25■■□□□ 1.47
PMS1-222ENST00000639501 DDX19AQ9NUU7 478 aaKnown RBP24.25■■□□□ 1.47
PMS1-222ENST00000639501 TTC41PQ6P2S7 1318 aa24.25■■□□□ 1.47
PMS1-222ENST00000639501 NPHP3Q7Z494 1330 aa24.25■■□□□ 1.47
PMS1-222ENST00000639501 KMT5BQ4FZB7 885 aa24.25■■□□□ 1.47
PMS1-222ENST00000639501 GOLGA6L4A6NEF3 574 aa24.24■■□□□ 1.47
PMS1-222ENST00000639501 GNAT3A8MTJ3 354 aa24.24■■□□□ 1.47
PMS1-222ENST00000639501 ZNF215Q9UL58 517 aaPredicted RBP24.24■■□□□ 1.47
PMS1-222ENST00000639501 FLT4P35916 1363 aa24.24■■□□□ 1.47
PMS1-222ENST00000639501 OS9Q13438 667 aaPredicted RBP24.24■■□□□ 1.47
PMS1-222ENST00000639501 KCNA6P17658 529 aa24.23■■□□□ 1.47
PMS1-222ENST00000639501 SCAND2PQ9GZW5 306 aaPredicted RBP24.23■■□□□ 1.47
PMS1-222ENST00000639501 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.23■■□□□ 1.47
PMS1-222ENST00000639501 ZKSCAN1P17029 563 aaPredicted RBP24.22■■□□□ 1.47
PMS1-222ENST00000639501 STK3Q13188 491 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 LRRC8AQ8IWT6 810 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 BICD2Q8TD16 824 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 ERBB3P21860 1342 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 SBNO1A3KN83 1393 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 SLC27A2O14975 620 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 ZBTB22O15209 634 aa24.22■■□□□ 1.47
PMS1-222ENST00000639501 C11orf57Q6ZUT1 292 aaPredicted RBP24.22■■□□□ 1.47
PMS1-222ENST00000639501 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 EIF2S2P20042 333 aaKnown RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 KCNJ4P48050 445 aa24.21■■□□□ 1.47
PMS1-222ENST00000639501 TAF7Q15545 349 aaPredicted RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 PA2G4Q9UQ80 394 aaKnown RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 TOB2Q14106 344 aaPredicted RBP24.21■■□□□ 1.47
PMS1-222ENST00000639501 BEND3Q5T5X7 828 aa24.21■■□□□ 1.47
PMS1-222ENST00000639501 ECHDC1Q9NTX5 307 aa24.21■■□□□ 1.47
PMS1-222ENST00000639501 A0A087WWV3 80 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 NMIQ13287 307 aaPredicted RBP24.2■■□□□ 1.46
PMS1-222ENST00000639501 ADGRL3Q9HAR2 1447 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 ANXA1P04083 346 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 PDCP20941 246 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 IQCB1Q15051 598 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 TERF2Q15554 542 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 MAP4K1Q92918 833 aa24.2■■□□□ 1.46
PMS1-222ENST00000639501 ADCY9O60503 1353 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 HTATSF1O43719 755 aaKnown RBP24.19■■□□□ 1.46
PMS1-222ENST00000639501 NYAP1Q6ZVC0 841 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 ST7Q9NRC1 585 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 PLEKHG3A1L390 1219 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 PI4KAP2A4QPH2 592 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 JAK2O60674 1132 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 CDC25BP30305 580 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 AMPHP49418 695 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 FBXO38Q6PIJ6 1188 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 CLASRPQ8N2M8 674 aaKnown RBP24.19■■□□□ 1.46
PMS1-222ENST00000639501 PI4KAP1Q8N8J0 262 aa24.19■■□□□ 1.46
PMS1-222ENST00000639501 GTF2E1P29083 439 aaPredicted RBP24.18■■□□□ 1.46
PMS1-222ENST00000639501 FGD1P98174 961 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms