RNA–Protein interactions for RNA: ENST00000638888.1

STRADA-233, Transcript of STE20-related kinase adaptor alpha, human

TSL 5 BASIC

Gene STRADA, Length 1,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-233	ENST00000638888	AIMP1	Q12904	312 aa	Known RBP	10.33	□□□□□ -0.76
STRADA-233	ENST00000638888	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
STRADA-233	ENST00000638888	NECTIN1	Q15223	517 aa		10.33	□□□□□ -0.76
STRADA-233	ENST00000638888	RIC3	Q7Z5B4	369 aa		10.33	□□□□□ -0.76
STRADA-233	ENST00000638888	XAGE3	Q8WTP9	111 aa		10.33	□□□□□ -0.76
STRADA-233	ENST00000638888	RFX5	P48382	616 aa	Predicted RBP	10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	PTH1R	Q03431	593 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	RABL6	Q3YEC7	729 aa	Predicted RBP	10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	RUFY3	Q7L099	469 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	COPS6	Q7L5N1	327 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	CADPS2	Q86UW7	1296 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	TMEM87A	Q8NBN3	555 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	ZSWIM6	Q9HCJ5	1215 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	COPRS	Q9NQ92	184 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	TMEM63C	Q9P1W3	806 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	LIMCH1	Q9UPQ0	1083 aa		10.32	□□□□□ -0.76
STRADA-233	ENST00000638888	TJP1	Q07157	1748 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	SHANK3	Q9BYB0	1731 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	CCDC171	Q6TFL3	1326 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	EPHA10	Q5JZY3	1008 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	VPS53	Q5VIR6	699 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	CHAMP1	Q96JM3	812 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	FMNL2	Q96PY5	1086 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	RFX7	Q2KHR2	1363 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	MED23	Q9ULK4	1368 aa		10.31	□□□□□ -0.76
STRADA-233	ENST00000638888	LRSAM1	Q6UWE0	723 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	ANKRD13D	Q6ZTN6	518 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	NOL8	Q76FK4	1167 aa	Known RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	DDX17	Q92841	729 aa	Known RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	MAP4K1	Q92918	833 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	ABCA3	Q99758	1704 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	MYD88	Q99836	296 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	USP16	Q9Y5T5	823 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	MYL6B	P14649	208 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	CAST	P20810	708 aa	Known RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	CASP7	P55210	303 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	TTC5	Q8N0Z6	440 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	RBSN	Q9H1K0	784 aa		10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	TLR7	Q9NYK1	1049 aa	Known RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	RBM27	Q9P2N5	1060 aa	Known RBP	10.3	□□□□□ -0.76
STRADA-233	ENST00000638888	KCP	Q6ZWJ8	1503 aa		10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	CSB-PGBD3	P0DP91	1061 aa		10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	NCL	P19338	710 aa	Known RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	PRIM1	P49642	420 aa	Known RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	TERF1	P54274	439 aa		10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	PTPN12	Q05209	780 aa	Known RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	ADCK5	Q3MIX3	580 aa		10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	PRPF40B	Q6NWY9	871 aa	Known RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	PDLIM2	Q96JY6	352 aa		10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	RBM8A	Q9Y5S9	174 aa	Known RBP	10.29	□□□□□ -0.76
STRADA-233	ENST00000638888	ST3GAL1	Q11201	340 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	NMI	Q13287	307 aa	Predicted RBP	10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	CHRNA2	Q15822	529 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	TSGA10IP	Q3SY00	556 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	CREB3L3	Q68CJ9	461 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	PLBD2	Q8NHP8	589 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	CABLES1	Q8TDN4	633 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	TRIM44	Q96DX7	344 aa	Predicted RBP	10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	ZMYND15	Q9H091	742 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	PDRG1	Q9NUG6	133 aa		10.28	□□□□□ -0.76
STRADA-233	ENST00000638888	LARGE1	O95461	756 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	ZSCAN22	P10073	491 aa	Predicted RBP	10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	ATP5J	P18859	108 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	TNNI3K	Q59H18	835 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	VSIG10	Q8N0Z9	540 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	KLHL34	Q8N239	644 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	FAM227B	Q96M60	508 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	JAKMIP1	Q96N16	626 aa	Known RBP	10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	CYP46A1	Q9Y6A2	500 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	FPGT-TNNI3K	V9GXZ4	949 aa		10.27	□□□□□ -0.76
STRADA-233	ENST00000638888	TNS2	Q63HR2	1409 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	WDR17	Q8IZU2	1322 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888		A0A0D9SFI3	127 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	SLC27A2	O14975	620 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	STX6	O43752	255 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	F13A1	P00488	732 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	ZKSCAN1	P17029	563 aa	Predicted RBP	10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	SYT1	P21579	422 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	HSPA1L	P34931	641 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	CABP4	P57796	275 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	NKX1-1	Q15270	411 aa	Predicted RBP	10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	HS1BP3	Q53T59	392 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	USPL1	Q5W0Q7	1092 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	KLHDC4	Q8TBB5	520 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	ANP32B	Q92688	251 aa	Known RBP	10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	SYAP1	Q96A49	352 aa	Predicted RBP	10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	SIL1	Q9H173	461 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	BOLA2	Q9H3K6	86 aa		10.27	□□□□□ -0.77
STRADA-233	ENST00000638888	PCDH11X	Q9BZA7	1347 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	PCDH11Y	Q9BZA8	1340 aa		10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	COL5A2	P05997	1499 aa	Predicted RBP	10.26	□□□□□ -0.77
STRADA-233	ENST00000638888	SPEF2	Q9C093	1822 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms