RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SMTNL1A8MU46 457 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 IARSP41252 1262 aaKnown RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 CEP170Q5SW79 1584 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 RNMTO43148 476 aaKnown RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 C6orf229H3BNL8 230 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-208ENST00000638372 SNX21Q969T3 373 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 MAP7D2Q96T17 732 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 DEF6Q9H4E7 631 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
SCARB2-208ENST00000638372 ZSCAN22P10073 491 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-208ENST00000638372 ANAPC15P60006 121 aa16.71■□□□□ 0.27
SCARB2-208ENST00000638372 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-208ENST00000638372 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
SCARB2-208ENST00000638372 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-208ENST00000638372 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.27
SCARB2-208ENST00000638372 PRM3Q9NNZ6 103 aa16.71■□□□□ 0.27
SCARB2-208ENST00000638372 IL15P40933 162 aaPredicted RBP16.71■□□□□ 0.27
SCARB2-208ENST00000638372 MBD5Q9P267 1494 aa16.71■□□□□ 0.26
SCARB2-208ENST00000638372 KLF18A0A0U1RQI7 1052 aa16.71■□□□□ 0.26
SCARB2-208ENST00000638372 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.26
SCARB2-208ENST00000638372 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 UBE2HP62256 183 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 CHMLP26374 656 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 ISM2Q6H9L7 571 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 DDX19AQ9NUU7 478 aaKnown RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 RNF123Q5XPI4 1314 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 IL2RBP14784 551 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 MCMDC2Q4G0Z9 681 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 DDX21Q9NR30 783 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 ZNF165P49910 485 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 ODF2Q5BJF6 829 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
SCARB2-208ENST00000638372 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
SCARB2-208ENST00000638372 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
SCARB2-208ENST00000638372 DCAF5Q96JK2 942 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 ACBD3Q9H3P7 528 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 MCM5P33992 734 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 NOM1Q5C9Z4 860 aaKnown RBP16.69■□□□□ 0.26
SCARB2-208ENST00000638372 SLC9C2Q5TAH2 1124 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 CPA1P15085 419 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 CHST3Q7LGC8 479 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
SCARB2-208ENST00000638372 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 CATIPQ7Z7H3 387 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
SCARB2-208ENST00000638372 TRPM2O94759 1503 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
SCARB2-208ENST00000638372 NLRP5P59047 1200 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 TFCP2Q12800 502 aa16.68■□□□□ 0.26
SCARB2-208ENST00000638372 ZNF76P36508 570 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 AK2P54819 239 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 Q6ZUG5 572 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 KDM6BO15054 1643 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 LTKP29376 864 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 DNM1Q05193 864 aaKnown RBP16.67■□□□□ 0.26
SCARB2-208ENST00000638372 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
SCARB2-208ENST00000638372 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 ZMYM4Q5VZL5 1548 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 ADCY5O95622 1261 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCARB2-208ENST00000638372 CCDC152Q4G0S7 254 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
SCARB2-208ENST00000638372 AK7Q96M32 723 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCARB2-208ENST00000638372 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 PNMA6EA0A0J9YXQ4 647 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-208ENST00000638372 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 DDB1Q16531 1140 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 TMOD2Q9NZR1 351 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 CCDC194A0A1B0GVG4 234 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
SCARB2-208ENST00000638372 TIMM10P62072 90 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms