RNA–Protein interactions for RNA: ENST00000637613.1

CHD2-228, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-228ENST00000637613 LAMC2Q13753 1193 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 ADGRE1Q14246 886 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 OCLNQ16625 522 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 EML3Q32P44 896 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 ZNF468Q5VIY5 522 aaPredicted RBP6.12□□□□□ -1.43
CHD2-228ENST00000637613 TRIM50Q86XT4 487 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 SIRT1Q96EB6 747 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 ZCCHC2Q9C0B9 1178 aaKnown RBP6.12□□□□□ -1.43
CHD2-228ENST00000637613 PCDHB9Q9Y5E1 797 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 HRH3Q9Y5N1 445 aa6.12□□□□□ -1.43
CHD2-228ENST00000637613 ELOA3CA0A087WX78 387 aaPredicted RBP6.11□□□□□ -1.43
CHD2-228ENST00000637613 ELOA3DA6NLF2 546 aaPredicted RBP6.11□□□□□ -1.43
CHD2-228ENST00000637613 IL2RAP01589 272 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 ATP1A2P50993 1020 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 COL9A3Q14050 684 aaPredicted RBP6.11□□□□□ -1.43
CHD2-228ENST00000637613 GRIK4Q16099 956 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 ELOA3BQ3SY89 546 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 RNF20Q5VTR2 975 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 TMEM214Q6NUQ4 689 aaKnown RBP6.11□□□□□ -1.43
CHD2-228ENST00000637613 NLRP8Q86W28 1048 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 ELOA3Q8NG57 546 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 CCDC85AQ96PX6 553 aaPredicted RBP6.11□□□□□ -1.43
CHD2-228ENST00000637613 PRDM6Q9NQX0 595 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 RAB6BQ9NRW1 208 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 EGFL7Q9UHF1 273 aa6.11□□□□□ -1.43
CHD2-228ENST00000637613 ATXN7O15265 892 aaPredicted RBP6.1□□□□□ -1.43
CHD2-228ENST00000637613 ZNF16P17020 682 aaPredicted RBP6.1□□□□□ -1.43
CHD2-228ENST00000637613 ALAS2P22557 587 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 PCBP4P57723 403 aaKnown RBP6.1□□□□□ -1.43
CHD2-228ENST00000637613 TNP2Q05952 138 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 MBTPS1Q14703 1052 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 FHDC1Q9C0D6 1143 aaPredicted RBP6.1□□□□□ -1.43
CHD2-228ENST00000637613 HCN2Q9UL51 889 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 KIAA1024Q9UPX6 916 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 NOD1Q9Y239 953 aa6.1□□□□□ -1.43
CHD2-228ENST00000637613 MAPTP10636 758 aaKnown RBP6.09□□□□□ -1.43
CHD2-228ENST00000637613 CD33P20138 364 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 IRAK1P51617 712 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 TXNRD3Q86VQ6 643 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 NPAS4Q8IUM7 802 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 MDFIQ99750 246 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 CXXC1Q9P0U4 656 aaPredicted RBP6.09□□□□□ -1.43
CHD2-228ENST00000637613 PCDHGA11Q9Y5H2 935 aa6.09□□□□□ -1.43
CHD2-228ENST00000637613 SCNN1AP37088 669 aa6.08□□□□□ -1.44
CHD2-228ENST00000637613 ECM1Q16610 540 aa6.08□□□□□ -1.44
CHD2-228ENST00000637613 XAGE2Q96GT9 111 aa6.08□□□□□ -1.44
CHD2-228ENST00000637613 ZNF594Q96JF6 807 aaPredicted RBP6.08□□□□□ -1.44
CHD2-228ENST00000637613 ESF1Q9H501 851 aaKnown RBP6.08□□□□□ -1.44
CHD2-228ENST00000637613 SEC13P55735 322 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 GTF2IP78347 998 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 RHBDD1Q8TEB9 315 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 TP53INP1Q96A56 240 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 PRR12Q9ULL5 1215 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 DOLKQ9UPQ8 538 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 RNF114Q9Y508 228 aa6.07□□□□□ -1.44
CHD2-228ENST00000637613 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 M0R082 166 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 ICMTO60725 284 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 VAMP1P23763 118 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 NRG1Q02297 640 aaPredicted RBP6.06□□□□□ -1.44
CHD2-228ENST00000637613 CCDC102BQ68D86 513 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 ZNF417Q8TAU3 575 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
CHD2-228ENST00000637613 ZNF587Q96SQ5 575 aaPredicted RBP6.06□□□□□ -1.44
CHD2-228ENST00000637613 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
CHD2-228ENST00000637613 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 ANKRD33BA6NCL7 494 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 M0R2N6 131 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 SELPP16109 830 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 WEE1P30291 646 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
CHD2-228ENST00000637613 BCL2L13Q9BXK5 485 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 PCDHB11Q9Y5F2 797 aa6.05□□□□□ -1.44
CHD2-228ENST00000637613 KHNYNO15037 678 aaKnown RBP6.04□□□□□ -1.44
CHD2-228ENST00000637613 PRMT3O60678 531 aa6.04□□□□□ -1.44
CHD2-228ENST00000637613 NID1P14543 1247 aa6.04□□□□□ -1.44
CHD2-228ENST00000637613 TAL1P17542 331 aaPredicted RBP6.04□□□□□ -1.44
CHD2-228ENST00000637613 ATP4AP20648 1035 aa6.04□□□□□ -1.44
CHD2-228ENST00000637613 PPARGC1BQ86YN6 1023 aaKnown RBP6.04□□□□□ -1.44
CHD2-228ENST00000637613 LENG1Q96BZ8 264 aaPredicted RBP6.04□□□□□ -1.44
CHD2-228ENST00000637613 PRIMPOLQ96LW4 560 aa6.04□□□□□ -1.44
CHD2-228ENST00000637613 SFI1A8K8P3 1242 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 ADARB2-AS1A8MUL3 147 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 USP4Q13107 963 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 COL19A1Q14993 1142 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 OXLD1Q5BKU9 147 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 TPCN2Q8NHX9 752 aa6.03□□□□□ -1.44
CHD2-228ENST00000637613 C21orf2O43822 256 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 FAM157BP0CG42 384 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 ARHGAP4P98171 946 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 MICALL1Q8N3F8 863 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 GIPC2Q8TF65 315 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 COL26A1Q96A83 441 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 ASB16Q96NS5 453 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 BIN2Q9UBW5 565 aaPredicted RBP6.02□□□□□ -1.45
CHD2-228ENST00000637613 STARD13Q9Y3M8 1113 aa6.02□□□□□ -1.45
CHD2-228ENST00000637613 SIN3BO75182 1162 aa6.01□□□□□ -1.45
CHD2-228ENST00000637613 ALBP02768 609 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms