RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ZBTB3Q9H5J0 574 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 CCT4P50991 539 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 IQCGQ9H095 443 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 SNX16P57768 344 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 ZBTB16Q05516 673 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 RUSC2Q8N2Y8 1516 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 CGNQ9P2M7 1197 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 CCDC194A0A1B0GVG4 234 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 STARD3NLO95772 234 aa18.78■□□□□ 0.6
CACNA1A-238ENST00000637276 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-238ENST00000637276 TSPY2A6NKD2 308 aa18.77■□□□□ 0.6
CACNA1A-238ENST00000637276 PTPN14Q15678 1187 aa18.77■□□□□ 0.6
CACNA1A-238ENST00000637276 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-238ENST00000637276 HYPKQ9NX55 129 aa18.77■□□□□ 0.6
CACNA1A-238ENST00000637276 ATP5J2-PTCD1G3V325 749 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 MAEAQ7L5Y9 396 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 CAPZA3Q96KX2 299 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 CTCFLQ8NI51 663 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 HEATR3Q7Z4Q2 680 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 CLIP2Q9UDT6 1046 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 FAM184BQ9ULE4 1060 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 C4orf50Q6ZRC1 276 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
CACNA1A-238ENST00000637276 TRIM6Q9C030 488 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 EHMT1Q9H9B1 1298 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 RFC4P35249 363 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 SEPT6Q14141 434 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 FERMT1Q9BQL6 677 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 CUL4BQ13620 913 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 CCDC114Q96M63 670 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 RBM27Q9P2N5 1060 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 PPP1R9BQ96SB3 815 aa18.75■□□□□ 0.59
CACNA1A-238ENST00000637276 PAFAH1B1P43034 410 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 FRMD4BQ9Y2L6 1034 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 CALML4Q96GE6 196 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 C8orf76Q96K31 380 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 ZNF213O14771 459 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 MICU3Q86XE3 530 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 SLC26A6Q9BXS9 759 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 LRRC2Q9BYS8 371 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 ZNF652Q9Y2D9 606 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 ABL1P00519 1130 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 C6orf163Q5TEZ5 329 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 GTF3C6Q969F1 213 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
CACNA1A-238ENST00000637276 TTC30AQ86WT1 665 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 STX6O43752 255 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 WASF1Q92558 559 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 TAOK3Q9H2K8 898 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 STX8Q9UNK0 236 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 NACADO15069 1562 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 F6X3S4 739 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 TSTA3Q13630 321 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 CCT6BQ92526 530 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 ZNF830Q96NB3 372 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 KAT14Q9H8E8 782 aa18.73■□□□□ 0.59
CACNA1A-238ENST00000637276 MVPQ14764 893 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 RSPH3Q86UC2 560 aa18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 ZYXQ15942 572 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 KCNK9Q9NPC2 374 aa18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 IFRD2Q12894 506 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 ANAPC4Q9UJX5 808 aa18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 CWC25Q9NXE8 425 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-238ENST00000637276 ACRBPQ8NEB7 543 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 RABEP2Q9H5N1 569 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 LIMCH1Q9UPQ0 1083 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 KRT5P13647 590 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 KIAA0753Q2KHM9 967 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 NACA2Q9H009 215 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 CEP83Q9Y592 693 aa18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 BZW2Q9Y6E2 419 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-238ENST00000637276 RNASE9P60153 205 aaKnown RBP18.71■□□□□ 0.58
CACNA1A-238ENST00000637276 KMT5BQ4FZB7 885 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 SLC5A1P13866 664 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 NOD1Q9Y239 953 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 GOLIM4O00461 696 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 IQCA1Q86XH1 822 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 USP25Q9UHP3 1055 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 ANKFY1Q9P2R3 1169 aa18.7■□□□□ 0.58
CACNA1A-238ENST00000637276 TBC1D5Q92609 795 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 CTNNA3Q9UI47 895 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 CFAP157Q5JU67 520 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 CCDC170Q8IYT3 715 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 AFG3L2Q9Y4W6 797 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 TBCAO75347 108 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 KIF4AO95239 1232 aa18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 SFPQP23246 707 aaKnown RBP eCLIP18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-238ENST00000637276 FAM13AO94988 1023 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms