RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FSTP19883 344 aa6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 NOS2P35228 1153 aa6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 UBE2OQ9C0C9 1292 aaKnown RBP6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 IGFLR1Q9H665 355 aa6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 BRD7Q9NPI1 651 aa6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 GPC6Q9Y625 555 aaPredicted RBP6.34□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 A6NJR5 290 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 TEAD4Q15561 434 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 PSAPL1Q6NUJ1 521 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 TRIM50Q86XT4 487 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 PLEKHM2Q8IWE5 1019 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 BHMTQ93088 406 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 SCHIP1Q9P0W5 487 aaPredicted RBP6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 NOD1Q9Y239 953 aa6.33□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 GP2P55259 537 aaKnown RBP6.32□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 KCNQ4P56696 695 aa6.32□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 FBXO11Q86XK2 927 aa6.32□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 CEP63Q96MT8 703 aa6.32□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 KCNH4Q9UQ05 1017 aa6.32□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 BACH1O14867 736 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 MED26O95402 600 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 ATP1A2P50993 1020 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 DTWD1Q8N5C7 304 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 POM121Q96HA1 1249 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 ZNF232Q9UNY5 417 aa6.31□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 RGS9O75916 674 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 SKIP12755 728 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 MSL1Q68DK7 614 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 RHPN1Q8TCX5 695 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 PCDHGA11Q9Y5H2 935 aa6.3□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 SFI1A8K8P3 1242 aa6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 USP17L5A8MUK1 530 aa6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 DZIP1LQ8IYY4 767 aaKnown RBP6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 FNBP4Q8N3X1 1017 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 HSH2DQ96JZ2 352 aa6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 M0R2N6 131 aa6.28□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 ATP9BO43861 1147 aa6.28□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 SH3PXD2AQ5TCZ1 1133 aa6.28□□□□□ -1.4
NPHP3-ACAD11-202ENST00000632629 SERTM1A2A2V5 107 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GTF2IP78347 998 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 JAG1P78504 1218 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 TYRO3Q06418 890 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 NCOA4Q13772 614 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 TBCELQ5QJ74 424 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ANKIB1Q9P2G1 1089 aa6.27□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 PIK3CDO00329 1044 aa6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 TGFB1P01137 390 aa6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 EPHA4P54764 986 aa6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ZNF280CQ8ND82 737 aa6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 USP17L3A6NCW0 530 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 USP17L4A6NCW7 530 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ADAMTS4O75173 837 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GRIK5Q16478 980 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 HDGFL1Q5TGJ6 251 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 USP17L2Q6R6M4 530 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 USP17L1Q7RTZ2 530 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 LARGE2Q8N3Y3 721 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 AKTIPQ9H8T0 292 aa6.25□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 POM121CA8CG34 1229 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 PTCD1O75127 700 aaKnown RBP6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ALX3O95076 343 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 PSME1Q06323 249 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 C1orf53Q5VUE5 145 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 FAM35AQ86V20 835 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 WFDC8Q8IUA0 241 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 TNS4Q8IZW8 715 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 ADAMTS19Q8TE59 1207 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GLMNQ92990 594 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 EFCC1Q9HA90 598 aa6.24□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 PALM3A6NDB9 673 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 SIX5Q8N196 739 aa6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 SUSD3Q96L08 255 aa6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 HCN4Q9Y3Q4 1203 aa6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 RBM19Q9Y4C8 960 aaKnown RBP6.23□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 DLL1O00548 723 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GSC2O15499 205 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 IGLV1-40P01703 118 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 CPB1P15086 417 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GAS2L2Q8NHY3 880 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 CLUAP1Q96AJ1 413 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 LPIN3Q9BQK8 851 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GSX2Q9BZM3 304 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 RAXQ9Y2V3 346 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 CHMP3Q9Y3E7 222 aa6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.22□□□□□ -1.41
NPHP3-ACAD11-202ENST00000632629 SPINK2P20155 84 aa6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 HIRAP54198 1017 aaPredicted RBP6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PLAURQ03405 335 aa6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms