RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 RIC3Q7Z5B4 369 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 SRP68Q9UHB9 627 aaKnown RBP6.49□□□□□ -1.37
LINC00550-201ENST00000629293 TBC1D2BQ9UPU7 963 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 TUBGCP6Q96RT7 1819 aa6.49□□□□□ -1.37
LINC00550-201ENST00000629293 RAD21O60216 631 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 LILRB3O75022 631 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 AEBP1Q8IUX7 1158 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 L3MBTL3Q96JM7 780 aaPredicted RBP6.48□□□□□ -1.37
LINC00550-201ENST00000629293 CCER2I3L3R5 266 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 MTHFSP49914 203 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 C1orf141Q5JVX7 400 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 NLGN1Q8N2Q7 840 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 C6orf132Q5T0Z8 1188 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
LINC00550-201ENST00000629293 FAM208AQ9UK61 1670 aaKnown RBP6.47□□□□□ -1.37
LINC00550-201ENST00000629293 SHANK3Q9BYB0 1731 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 C9orf131Q5VYM1 1079 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 SLC4A9Q96Q91 983 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 CHRNA5P30532 468 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 PLEKHO1Q53GL0 409 aaPredicted RBP6.47□□□□□ -1.37
LINC00550-201ENST00000629293 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 NFATC2IPQ8NCF5 419 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 RNF181Q9P0P0 153 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 GYS1P13807 737 aa6.47□□□□□ -1.37
LINC00550-201ENST00000629293 RTL5Q5HYW3 569 aaPredicted RBP6.47□□□□□ -1.37
LINC00550-201ENST00000629293 PLCG2P16885 1265 aa6.46□□□□□ -1.37
LINC00550-201ENST00000629293 SULT6B1Q6IMI4 303 aa6.46□□□□□ -1.37
LINC00550-201ENST00000629293 BICDL1Q6ZP65 573 aa6.46□□□□□ -1.37
LINC00550-201ENST00000629293 FBXW7Q969H0 707 aa6.46□□□□□ -1.37
LINC00550-201ENST00000629293 PANK3Q9H999 370 aa6.46□□□□□ -1.37
LINC00550-201ENST00000629293 CRKLP46109 303 aaKnown RBP6.46□□□□□ -1.38
LINC00550-201ENST00000629293 CLCN6P51797 869 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 MFAP1P55081 439 aaKnown RBP6.46□□□□□ -1.38
LINC00550-201ENST00000629293 DCAF5Q96JK2 942 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 GZF1Q9H116 711 aaPredicted RBP6.46□□□□□ -1.38
LINC00550-201ENST00000629293 PCDHB15Q9Y5E8 787 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 LY75O60449 1722 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 TOMM70O94826 608 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 C4BP0C0L5 1744 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 SLC39A6Q13433 755 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 PIM2Q9P1W9 311 aa6.46□□□□□ -1.38
LINC00550-201ENST00000629293 C5P01031 1676 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 NPHP1O15259 732 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 ZPR1O75312 459 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 RPS6KA4O75676 772 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 HSP90AB1P08238 724 aaKnown RBP6.45□□□□□ -1.38
LINC00550-201ENST00000629293 HMOX1P09601 288 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 DALRD3Q5D0E6 543 aaKnown RBP6.45□□□□□ -1.38
LINC00550-201ENST00000629293 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
LINC00550-201ENST00000629293 GJA5P36382 358 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 APLP1P51693 650 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 TGFB2P61812 414 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 FOXD4L5Q5VV16 416 aaPredicted RBP6.45□□□□□ -1.38
LINC00550-201ENST00000629293 FOXD4L4Q8WXT5 416 aaPredicted RBP6.45□□□□□ -1.38
LINC00550-201ENST00000629293 USP54Q70EL1 1684 aa6.45□□□□□ -1.38
LINC00550-201ENST00000629293 ADCY9O60503 1353 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 KIF24Q5T7B8 1368 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 MOXD2PA6NHM9 499 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 ERVV-2B6SEH9 535 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 CCDC24Q8N4L8 307 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 ADAM33Q9BZ11 813 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 RRAGCQ9HB90 399 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 CARNS1A5YM72 827 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 DNAJC10Q8IXB1 793 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 TRIM34Q9BYJ4 488 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 KNSTRNQ9Y448 316 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 PXDNLA1KZ92 1463 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 ANP32CO43423 234 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 HSPA5P11021 654 aaKnown RBP6.44□□□□□ -1.38
LINC00550-201ENST00000629293 NDUFV2P19404 249 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 CANXP27824 592 aaKnown RBP6.44□□□□□ -1.38
LINC00550-201ENST00000629293 PRSS12P56730 875 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 RASSF7Q02833 373 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 USPL1Q5W0Q7 1092 aa6.44□□□□□ -1.38
LINC00550-201ENST00000629293 EIF4G2P78344 907 aaKnown RBP eCLIP6.43□□□□□ -1.38
LINC00550-201ENST00000629293 DDR1Q08345 913 aa6.43□□□□□ -1.38
LINC00550-201ENST00000629293 ITGB4P16144 1822 aa6.43□□□□□ -1.38
LINC00550-201ENST00000629293 COL9A1P20849 921 aa6.43□□□□□ -1.38
LINC00550-201ENST00000629293 AMOTQ4VCS5 1084 aa6.43□□□□□ -1.38
LINC00550-201ENST00000629293 HMX1Q9NP08 348 aaPredicted RBP6.43□□□□□ -1.38
LINC00550-201ENST00000629293 CICQ96RK0 1608 aaPredicted RBP6.43□□□□□ -1.38
LINC00550-201ENST00000629293 LGR6Q9HBX8 967 aa6.43□□□□□ -1.38
LINC00550-201ENST00000629293 KDM2BQ8NHM5 1336 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 TOGARAM1Q9Y4F4 1720 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.42□□□□□ -1.38
LINC00550-201ENST00000629293 TMEM88BA6NKF7 163 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 IGSF3O75054 1194 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 ZNF622Q969S3 477 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC00550-201ENST00000629293 CDCA7LQ96GN5 454 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 UCN2Q96RP3 112 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 TAF1LQ8IZX4 1826 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 RCCD1A6NED2 376 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 CC2D1BQ5T0F9 858 aaKnown RBP6.42□□□□□ -1.38
LINC00550-201ENST00000629293 RC3H1Q5TC82 1133 aaKnown RBP6.42□□□□□ -1.38
LINC00550-201ENST00000629293 TMCO4Q5TGY1 634 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 QSER1Q2KHR3 1735 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 CNTNAP4Q9C0A0 1308 aa6.42□□□□□ -1.38
LINC00550-201ENST00000629293 USP42Q9H9J4 1324 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms