RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 SIN3AQ96ST3 1273 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KRT82Q9NSB4 513 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 HOMER2Q9NSB8 354 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PIK3C2AO00443 1686 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 C4AP0C0L4 1744 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 C4BP0C0L5 1744 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 IRX4P78413 519 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CFAP58Q5T655 872 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 RALYLQ86SE5 291 aaKnown RBP3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CHMP5Q9NZZ3 219 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EMC3Q9P0I2 261 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 A0A0G2JS52 829 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TACC1O75410 805 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 IRX1P78414 480 aaPredicted RBP3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TBC1D10BQ4KMP7 808 aaPredicted RBP3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ANKRD45Q5TZF3 282 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 NUTM2DQ5VT03 806 aaPredicted RBP3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 MRFAP1L1Q96HT8 127 aa3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PAWRQ96IZ0 340 aaKnown RBP3.35□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CDK13Q14004 1512 aaKnown RBP3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 HNRNPCP07910 306 aaKnown RBP eCLIP3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 LMNB2Q03252 620 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 UBE2Q1Q7Z7E8 422 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 BANK1Q8NDB2 785 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TRIM11Q96F44 468 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CTAGE1Q96RT6 745 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 UBAP1Q9NZ09 502 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 STAG3Q9UJ98 1225 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ECM29Q5VYK3 1845 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CBFA2T2O43439 604 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 RLBP1P12271 317 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ANKRD1Q15327 319 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CEP85LQ5SZL2 805 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 WWC2Q6AWC2 1192 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 OTUD6BQ8N6M0 293 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 MSANTD4Q8NCY6 345 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EPSTI1Q96J88 318 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 VCXQ9H320 206 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PARVBQ9HBI1 364 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 HELLSQ9NRZ9 838 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KDM2AQ9Y2K7 1162 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TRIM17Q9Y577 477 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SLC4A7Q9Y6M7 1214 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KIF13BQ9NQT8 1826 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KDM1AO60341 852 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ATP6V1AP38606 617 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DAB2P98082 770 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KIF6Q6ZMV9 814 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EHBP1Q8NDI1 1231 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SDF4Q9BRK5 362 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 VCX3AQ9NNX9 186 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 LARSQ9P2J5 1176 aaKnown RBP3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 MAP7Q14244 749 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TSNAXIP1Q2TAA8 658 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 RUFY3Q7L099 469 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SKAP1Q86WV1 359 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 LUC7L2Q9Y383 392 aaKnown RBP3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 MAPKBP1O60336 1514 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 RGL3Q3MIN7 710 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CERS3Q8IU89 383 aa3.34□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EPB41L2O43491 1005 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 TSC22D2O75157 780 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 VDRP11473 427 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 FOSL2P15408 326 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 CHMP4BP1P59074 171 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 KIF22Q14807 665 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 CEP128Q6ZU80 1094 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 TCP11Q8WWU5 503 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 MAML3Q96JK9 1138 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 PRIMPOLQ96LW4 560 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 MAK16Q9BXY0 300 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 DNAJC25Q9H1X3 360 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 LONP1P36776 959 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 CASP2P42575 452 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SLC4A3P48751 1232 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SMARCC2Q8TAQ2 1214 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SCLT1Q96NL6 688 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 TIAM1Q13009 1591 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 EIF2S2P20042 333 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 CCT6AP40227 531 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 PNISRQ8TF01 805 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 JAKMIP1Q96N16 626 aaKnown RBP3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 TANGO6Q9C0B7 1094 aa3.34□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 TOPAZ1Q8N9V7 1692 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 MAN1A1P33908 653 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 GTF2F1P35269 517 aaKnown RBP eCLIP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SAMD1Q6SPF0 538 aaPredicted RBP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 RIOK1Q9BRS2 568 aaKnown RBP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 KIF7Q2M1P5 1343 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SFI1A8K8P3 1242 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 EEF2P13639 858 aaKnown RBP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 SPECC1Q5M775 1068 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 DDX17Q92841 729 aaKnown RBP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 LZTFL1Q9NQ48 299 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 IQANK1A0A1B0GTG1 560 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 BECN2A8MW95 431 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 CTAGE5O15320 804 aa3.33□□□□□ -1.88
KCNIP4-IT1-201ENST00000627566 MYCNP04198 464 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms