RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 RIPK4P57078 832 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 TEX13AQ9BXU3 409 aaPredicted RBP11.74□□□□□ -0.53
CHD2-206ENST00000625990 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
CHD2-206ENST00000625990 GPTP24298 496 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 SP7Q8TDD2 431 aaPredicted RBP11.73□□□□□ -0.53
CHD2-206ENST00000625990 ABCC12Q96J65 1359 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 RRAGCQ9HB90 399 aa11.73□□□□□ -0.53
CHD2-206ENST00000625990 NIP7Q9Y221 180 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHD2-206ENST00000625990 SBF1O95248 1867 aa11.72□□□□□ -0.53
CHD2-206ENST00000625990 HTATSF1O43719 755 aaKnown RBP11.72□□□□□ -0.53
CHD2-206ENST00000625990 EIF2S2P20042 333 aaKnown RBP11.72□□□□□ -0.53
CHD2-206ENST00000625990 CCDC184Q52MB2 194 aa11.72□□□□□ -0.53
CHD2-206ENST00000625990 PAXIP1Q6ZW49 1069 aaPredicted RBP11.72□□□□□ -0.53
CHD2-206ENST00000625990 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
CHD2-206ENST00000625990 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
CHD2-206ENST00000625990 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
CHD2-206ENST00000625990 UBN2Q6ZU65 1347 aa11.71□□□□□ -0.53
CHD2-206ENST00000625990 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
CHD2-206ENST00000625990 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.53
CHD2-206ENST00000625990 RALBP1Q15311 655 aa11.71□□□□□ -0.53
CHD2-206ENST00000625990 PRPF40BQ6NWY9 871 aaKnown RBP11.71□□□□□ -0.53
CHD2-206ENST00000625990 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
CHD2-206ENST00000625990 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
CHD2-206ENST00000625990 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.53
CHD2-206ENST00000625990 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
CHD2-206ENST00000625990 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
CHD2-206ENST00000625990 NEFMP07197 916 aa11.7□□□□□ -0.54
CHD2-206ENST00000625990 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
CHD2-206ENST00000625990 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
CHD2-206ENST00000625990 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
CHD2-206ENST00000625990 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
CHD2-206ENST00000625990 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
CHD2-206ENST00000625990 SRGNP10124 158 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 HSPA6P17066 643 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 PDE6BP35913 854 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 ST5P78524 1137 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 PDIA6Q15084 440 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
CHD2-206ENST00000625990 LMNB1P20700 586 aa11.68□□□□□ -0.54
CHD2-206ENST00000625990 AIMP1Q12904 312 aaKnown RBP11.68□□□□□ -0.54
CHD2-206ENST00000625990 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
CHD2-206ENST00000625990 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
CHD2-206ENST00000625990 SYNE4Q8N205 404 aa11.68□□□□□ -0.54
CHD2-206ENST00000625990 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
CHD2-206ENST00000625990 POTECB2RU33 542 aa11.67□□□□□ -0.54
CHD2-206ENST00000625990 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
CHD2-206ENST00000625990 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
CHD2-206ENST00000625990 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
CHD2-206ENST00000625990 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
CHD2-206ENST00000625990 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
CHD2-206ENST00000625990 ZNF277Q9NRM2 450 aaPredicted RBP11.67□□□□□ -0.54
CHD2-206ENST00000625990 NUP98P52948 1817 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 TOMM70O94826 608 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHD2-206ENST00000625990 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
CHD2-206ENST00000625990 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
CHD2-206ENST00000625990 DDNO94850 711 aaPredicted RBP11.65□□□□□ -0.54
CHD2-206ENST00000625990 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
CHD2-206ENST00000625990 GOLGA2Q08379 1002 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
CHD2-206ENST00000625990 XAGE3Q8WTP9 111 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 C7orf43Q8WVR3 580 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 RUNDC1Q96C34 613 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 TAOK3Q9H2K8 898 aa11.65□□□□□ -0.54
CHD2-206ENST00000625990 COL4A5P29400 1685 aa11.65□□□□□ -0.55
CHD2-206ENST00000625990 ZNF541Q9H0D2 1346 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
CHD2-206ENST00000625990 COPS6Q7L5N1 327 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 CHPF2Q9P2E5 772 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 COL4A1P02462 1669 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
CHD2-206ENST00000625990 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 GLTPD2A6NH11 291 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 ELL2O00472 640 aaPredicted RBP11.63□□□□□ -0.55
CHD2-206ENST00000625990 APAF1O14727 1248 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 NTSR2O95665 410 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
CHD2-206ENST00000625990 ZNF34Q8IZ26 560 aa11.63□□□□□ -0.55
CHD2-206ENST00000625990 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
CHD2-206ENST00000625990 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
CHD2-206ENST00000625990 CHL1O00533 1208 aa11.62□□□□□ -0.55
CHD2-206ENST00000625990 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
CHD2-206ENST00000625990 NPR1P16066 1061 aa11.62□□□□□ -0.55
CHD2-206ENST00000625990 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms