RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
USP8-219ENST00000625664 NLRP10Q86W26 655 aa16.29■□□□□ 0.2
USP8-219ENST00000625664 PLBD2Q8NHP8 589 aa16.29■□□□□ 0.2
USP8-219ENST00000625664 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
USP8-219ENST00000625664 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
USP8-219ENST00000625664 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
USP8-219ENST00000625664 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
USP8-219ENST00000625664 C3orf67Q6ZVT6 689 aa16.28■□□□□ 0.2
USP8-219ENST00000625664 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
USP8-219ENST00000625664 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
USP8-219ENST00000625664 FER1L6Q2WGJ9 1857 aa16.28■□□□□ 0.2
USP8-219ENST00000625664 IL16Q14005 1332 aa16.27■□□□□ 0.2
USP8-219ENST00000625664 OLFM4Q6UX06 510 aa16.27■□□□□ 0.2
USP8-219ENST00000625664 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
USP8-219ENST00000625664 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.2
USP8-219ENST00000625664 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
USP8-219ENST00000625664 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
USP8-219ENST00000625664 KIF3CO14782 793 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 ALDH1B1P30837 517 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
USP8-219ENST00000625664 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
USP8-219ENST00000625664 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
USP8-219ENST00000625664 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
USP8-219ENST00000625664 SLC10A5Q5PT55 438 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 WDR63Q8IWG1 891 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 ISCA1Q9BUE6 129 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
USP8-219ENST00000625664 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
USP8-219ENST00000625664 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
USP8-219ENST00000625664 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
USP8-219ENST00000625664 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
USP8-219ENST00000625664 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
USP8-219ENST00000625664 KDM2BQ8NHM5 1336 aa16.23■□□□□ 0.19
USP8-219ENST00000625664 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
USP8-219ENST00000625664 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
USP8-219ENST00000625664 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
USP8-219ENST00000625664 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
USP8-219ENST00000625664 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
USP8-219ENST00000625664 MYD88Q99836 296 aa16.22■□□□□ 0.19
USP8-219ENST00000625664 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
USP8-219ENST00000625664 LAMB2P55268 1798 aa16.22■□□□□ 0.19
USP8-219ENST00000625664 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP8-219ENST00000625664 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
USP8-219ENST00000625664 ZNF277Q9NRM2 450 aaPredicted RBP16.21■□□□□ 0.19
USP8-219ENST00000625664 DICER1Q9UPY3 1922 aaKnown RBP16.21■□□□□ 0.19
USP8-219ENST00000625664 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.18
USP8-219ENST00000625664 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.18
USP8-219ENST00000625664 RTKN2Q8IZC4 609 aa16.21■□□□□ 0.18
USP8-219ENST00000625664 RRAGCQ9HB90 399 aa16.21■□□□□ 0.18
USP8-219ENST00000625664 ABCC4O15439 1325 aa16.2■□□□□ 0.18
USP8-219ENST00000625664 GLTPD2A6NH11 291 aa16.2■□□□□ 0.18
USP8-219ENST00000625664 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
USP8-219ENST00000625664 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
USP8-219ENST00000625664 G2E3Q7L622 706 aa16.2■□□□□ 0.18
USP8-219ENST00000625664 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
USP8-219ENST00000625664 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
USP8-219ENST00000625664 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
USP8-219ENST00000625664 PI4KAP2A4QPH2 592 aa16.18■□□□□ 0.18
USP8-219ENST00000625664 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
USP8-219ENST00000625664 PI4KAP1Q8N8J0 262 aa16.18■□□□□ 0.18
USP8-219ENST00000625664 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
USP8-219ENST00000625664 SNED1Q8TER0 1413 aa16.18■□□□□ 0.18
USP8-219ENST00000625664 VAMP4O75379 141 aa16.17■□□□□ 0.18
USP8-219ENST00000625664 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
USP8-219ENST00000625664 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
USP8-219ENST00000625664 C16orf71Q8IYS4 520 aaPredicted RBP16.17■□□□□ 0.18
USP8-219ENST00000625664 MYH16Q9H6N6 1097 aa16.17■□□□□ 0.18
USP8-219ENST00000625664 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
USP8-219ENST00000625664 TOMM70O94826 608 aa16.17■□□□□ 0.18
USP8-219ENST00000625664 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
USP8-219ENST00000625664 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
USP8-219ENST00000625664 JARID2Q92833 1246 aaPredicted RBP16.17■□□□□ 0.18
USP8-219ENST00000625664 TAF1P21675 1872 aa16.16■□□□□ 0.18
USP8-219ENST00000625664 ZBTB38Q8NAP3 1195 aaPredicted RBP16.16■□□□□ 0.18
USP8-219ENST00000625664 CCDC191Q8NCU4 936 aa16.16■□□□□ 0.18
USP8-219ENST00000625664 PSMD1Q99460 953 aa16.16■□□□□ 0.18
USP8-219ENST00000625664 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
USP8-219ENST00000625664 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
USP8-219ENST00000625664 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
USP8-219ENST00000625664 FLIIQ13045 1269 aa16.15■□□□□ 0.18
USP8-219ENST00000625664 GRAPQ13588 217 aa16.15■□□□□ 0.18
USP8-219ENST00000625664 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
USP8-219ENST00000625664 TMX4Q9H1E5 349 aaPredicted RBP16.15■□□□□ 0.18
USP8-219ENST00000625664 CCER2I3L3R5 266 aa16.14■□□□□ 0.17
USP8-219ENST00000625664 BBOX1O75936 387 aa16.14■□□□□ 0.17
USP8-219ENST00000625664 DDNO94850 711 aaPredicted RBP16.14■□□□□ 0.17
USP8-219ENST00000625664 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
USP8-219ENST00000625664 SF3B3Q15393 1217 aaKnown RBP16.14■□□□□ 0.17
USP8-219ENST00000625664 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
USP8-219ENST00000625664 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
USP8-219ENST00000625664 VEGFAP15692 232 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms