RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CWC27Q6UX04 472 aaKnown RBP23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 RUFY2Q8WXA3 655 aa23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 DIAPH3Q9NSV4 1193 aa23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
PCDHB11-202ENST00000624887 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
PCDHB11-202ENST00000624887 TLR7Q9NYK1 1049 aaKnown RBP23.9■■□□□ 1.42
PCDHB11-202ENST00000624887 CLEC17AQ6ZS10 378 aa23.89■■□□□ 1.42
PCDHB11-202ENST00000624887 PIGBQ92521 554 aa23.89■■□□□ 1.42
PCDHB11-202ENST00000624887 PLCH1Q4KWH8 1693 aa23.89■■□□□ 1.42
PCDHB11-202ENST00000624887 TJP1Q07157 1748 aa23.89■■□□□ 1.42
PCDHB11-202ENST00000624887 NUCB2P80303 420 aa23.89■■□□□ 1.41
PCDHB11-202ENST00000624887 KIAA1211Q6ZU35 1233 aa23.89■■□□□ 1.41
PCDHB11-202ENST00000624887 CCDC191Q8NCU4 936 aa23.89■■□□□ 1.41
PCDHB11-202ENST00000624887 TEX13AQ9BXU3 409 aaPredicted RBP23.89■■□□□ 1.41
PCDHB11-202ENST00000624887 ITGB4P16144 1822 aa23.88■■□□□ 1.41
PCDHB11-202ENST00000624887 TRAK2O60296 914 aa23.88■■□□□ 1.41
PCDHB11-202ENST00000624887 SSFA2P28290 1259 aa23.88■■□□□ 1.41
PCDHB11-202ENST00000624887 FOXO4P98177 505 aa23.88■■□□□ 1.41
PCDHB11-202ENST00000624887 TMX3Q96JJ7 454 aa23.87■■□□□ 1.41
PCDHB11-202ENST00000624887 ZBTB3Q9H5J0 574 aa23.87■■□□□ 1.41
PCDHB11-202ENST00000624887 ASAP1Q9ULH1 1129 aa23.87■■□□□ 1.41
PCDHB11-202ENST00000624887 LMBR1LQ6UX01 489 aa23.87■■□□□ 1.41
PCDHB11-202ENST00000624887 JCADQ9P266 1359 aa23.86■■□□□ 1.41
PCDHB11-202ENST00000624887 HIP1O00291 1037 aa23.86■■□□□ 1.41
PCDHB11-202ENST00000624887 CYP2E1P05181 493 aaPredicted RBP23.86■■□□□ 1.41
PCDHB11-202ENST00000624887 ZGPATQ8N5A5 531 aaKnown RBP23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 ATG3Q9NT62 314 aa23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 PTMSP20962 102 aa23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 TNNI3KQ59H18 835 aa23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 FPGT-TNNI3KV9GXZ4 949 aa23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 LRP6O75581 1613 aa23.85■■□□□ 1.41
PCDHB11-202ENST00000624887 TFCP2Q12800 502 aa23.84■■□□□ 1.41
PCDHB11-202ENST00000624887 CUL4AQ13619 759 aa23.84■■□□□ 1.41
PCDHB11-202ENST00000624887 BOLA2Q9H3K6 86 aa23.84■■□□□ 1.41
PCDHB11-202ENST00000624887 SNX14Q9Y5W7 946 aa23.84■■□□□ 1.41
PCDHB11-202ENST00000624887 NRAPQ86VF7 1730 aa23.84■■□□□ 1.41
PCDHB11-202ENST00000624887 UPF3BQ9BZI7 483 aaKnown RBP23.83■■□□□ 1.41
PCDHB11-202ENST00000624887 DNAJC10Q8IXB1 793 aa23.83■■□□□ 1.41
PCDHB11-202ENST00000624887 ISCA1Q9BUE6 129 aa23.83■■□□□ 1.41
PCDHB11-202ENST00000624887 SLIT2O94813 1529 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 DBNLQ9UJU6 430 aaKnown RBP23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 BCL9O00512 1426 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 WNK3Q9BYP7 1800 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 SPATA31A1Q5TZJ5 1347 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 STARD3NLO95772 234 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 ATP5JP18859 108 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 SNRKQ9NRH2 765 aa23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 THRAP3Q9Y2W1 955 aaKnown RBP23.82■■□□□ 1.4
PCDHB11-202ENST00000624887 TCIRG1Q13488 830 aa23.81■■□□□ 1.4
PCDHB11-202ENST00000624887 INTS4Q96HW7 963 aaKnown RBP23.81■■□□□ 1.4
PCDHB11-202ENST00000624887 EXOC5O00471 708 aa23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 TRIM28Q13263 835 aaKnown RBP23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 RASEFQ8IZ41 740 aa23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 NWD2Q9ULI1 1742 aa23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 BAG4O95429 457 aaKnown RBP23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 PTH1RQ03431 593 aa23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
PCDHB11-202ENST00000624887 NMIQ13287 307 aaPredicted RBP23.79■■□□□ 1.4
PCDHB11-202ENST00000624887 PKP1Q13835 747 aa23.79■■□□□ 1.4
PCDHB11-202ENST00000624887 KCNB2Q92953 911 aa23.79■■□□□ 1.4
PCDHB11-202ENST00000624887 FSD1Q9BTV5 496 aa23.79■■□□□ 1.4
PCDHB11-202ENST00000624887 GOLGA6L22H0YM25 854 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 SKOR2Q2VWA4 1001 aaPredicted RBP23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 FAM227BQ96M60 508 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 CCDC171Q6TFL3 1326 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 KIF6Q6ZMV9 814 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 ATG9AQ7Z3C6 839 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 TTC14Q96N46 770 aa23.78■■□□□ 1.4
PCDHB11-202ENST00000624887 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
PCDHB11-202ENST00000624887 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
PCDHB11-202ENST00000624887 DBNDD2Q9BQY9 259 aa23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 GPR108Q9NPR9 543 aa23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 ZNF330Q9Y3S2 320 aaPredicted RBP23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 IL15P40933 162 aaPredicted RBP23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 NECTIN1Q15223 517 aa23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 ZDHHC9Q9Y397 364 aa23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
PCDHB11-202ENST00000624887 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
PCDHB11-202ENST00000624887 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
PCDHB11-202ENST00000624887 GZF1Q9H116 711 aaPredicted RBP23.75■■□□□ 1.39
PCDHB11-202ENST00000624887 RFX7Q2KHR2 1363 aa23.75■■□□□ 1.39
PCDHB11-202ENST00000624887 MED23Q9ULK4 1368 aa23.75■■□□□ 1.39
PCDHB11-202ENST00000624887 A0A0D9SFI3 127 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 SLC4A9Q96Q91 983 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 TM6SF1Q9BZW5 370 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 MAP3K15Q6ZN16 1313 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 CIAO1O76071 339 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 CYP19A1P11511 503 aaPredicted RBP23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 HAUS7Q99871 368 aa23.74■■□□□ 1.39
PCDHB11-202ENST00000624887 EYA2O00167 538 aa23.73■■□□□ 1.39
PCDHB11-202ENST00000624887 PCCAP05165 728 aaPredicted RBP23.73■■□□□ 1.39
PCDHB11-202ENST00000624887 GIGYF2Q6Y7W6 1299 aaKnown RBP23.73■■□□□ 1.39
PCDHB11-202ENST00000624887 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
PCDHB11-202ENST00000624887 RBM8AQ9Y5S9 174 aaKnown RBP23.73■■□□□ 1.39
PCDHB11-202ENST00000624887 KAT6BQ8WYB5 2073 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms