RNA–Protein interactions for RNA: ENST00000624069.3

RPL13A-214, Transcript of ribosomal protein L13a, humanhuman

TSL 1 (best)

Gene RPL13A, Length 1,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-214ENST00000624069 CCDC27Q2M243 656 aa19.56■□□□□ 0.72
RPL13A-214ENST00000624069 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
RPL13A-214ENST00000624069 TEX13AQ9BXU3 409 aaPredicted RBP19.56■□□□□ 0.72
RPL13A-214ENST00000624069 DDX21Q9NR30 783 aaKnown RBP eCLIP19.56■□□□□ 0.72
RPL13A-214ENST00000624069 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
RPL13A-214ENST00000624069 LAS1LQ9Y4W2 734 aaKnown RBP19.55■□□□□ 0.72
RPL13A-214ENST00000624069 ADAMTSL1Q8N6G6 1762 aa19.55■□□□□ 0.72
RPL13A-214ENST00000624069 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
RPL13A-214ENST00000624069 A1BGP04217 495 aa19.54■□□□□ 0.72
RPL13A-214ENST00000624069 NPR1P16066 1061 aa19.54■□□□□ 0.72
RPL13A-214ENST00000624069 OLFM4Q6UX06 510 aa19.54■□□□□ 0.72
RPL13A-214ENST00000624069 NGEFQ8N5V2 710 aa19.54■□□□□ 0.72
RPL13A-214ENST00000624069 CAPNS2Q96L46 248 aa19.54■□□□□ 0.72
RPL13A-214ENST00000624069 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
RPL13A-214ENST00000624069 FMR1Q06787 632 aaKnown RBP eCLIP19.53■□□□□ 0.721e-18■■■□□ 19
RPL13A-214ENST00000624069 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
RPL13A-214ENST00000624069 GPR101Q96P66 508 aaPredicted RBP19.53■□□□□ 0.72
RPL13A-214ENST00000624069 BEGAINQ9BUH8 593 aa19.53■□□□□ 0.72
RPL13A-214ENST00000624069 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
RPL13A-214ENST00000624069 ECE1P42892 770 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
RPL13A-214ENST00000624069 GNAI1P63096 354 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 GPC2Q8N158 579 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 CFAP44Q96MT7 982 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 IFT57Q9NWB7 429 aa19.52■□□□□ 0.72
RPL13A-214ENST00000624069 CHL1O00533 1208 aa19.51■□□□□ 0.71
RPL13A-214ENST00000624069 IARSP41252 1262 aaKnown RBP19.51■□□□□ 0.71
RPL13A-214ENST00000624069 SYNE4Q8N205 404 aa19.51■□□□□ 0.71
RPL13A-214ENST00000624069 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
RPL13A-214ENST00000624069 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
RPL13A-214ENST00000624069 DZIP3Q86Y13 1208 aaKnown RBP19.5■□□□□ 0.71
RPL13A-214ENST00000624069 CST9Q5W186 159 aa19.49■□□□□ 0.71
RPL13A-214ENST00000624069 CLEC4GQ6UXB4 293 aa19.49■□□□□ 0.71
RPL13A-214ENST00000624069 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
RPL13A-214ENST00000624069 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
RPL13A-214ENST00000624069 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
RPL13A-214ENST00000624069 IL16Q14005 1332 aa19.49■□□□□ 0.71
RPL13A-214ENST00000624069 ZNF853P0CG23 659 aa19.48■□□□□ 0.71
RPL13A-214ENST00000624069 GRM1Q13255 1194 aa19.48■□□□□ 0.71
RPL13A-214ENST00000624069 MCOLN1Q9GZU1 580 aa19.48■□□□□ 0.71
RPL13A-214ENST00000624069 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
RPL13A-214ENST00000624069 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
RPL13A-214ENST00000624069 MAP2K2P36507 400 aa19.47■□□□□ 0.71
RPL13A-214ENST00000624069 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
RPL13A-214ENST00000624069 TLL2Q9Y6L7 1015 aa19.47■□□□□ 0.71
RPL13A-214ENST00000624069 EPS15P42566 896 aa19.46■□□□□ 0.71
RPL13A-214ENST00000624069 JDP2Q8WYK2 163 aa19.46■□□□□ 0.71
RPL13A-214ENST00000624069 TRAF5O00463 557 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 AOC2O75106 756 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 TPTE2Q6XPS3 522 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 PSMD1Q99460 953 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 GJA3Q9Y6H8 435 aa19.45■□□□□ 0.7
RPL13A-214ENST00000624069 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
RPL13A-214ENST00000624069 THSD7BQ9C0I4 1608 aa19.44■□□□□ 0.7
RPL13A-214ENST00000624069 ALDH1B1P30837 517 aa19.44■□□□□ 0.7
RPL13A-214ENST00000624069 PIP4K2AP48426 406 aaPredicted RBP19.44■□□□□ 0.7
RPL13A-214ENST00000624069 SCNN1DP51172 638 aa19.44■□□□□ 0.7
RPL13A-214ENST00000624069 EIF6P56537 245 aaKnown RBP19.44■□□□□ 0.7
RPL13A-214ENST00000624069 SNED1Q8TER0 1413 aa19.43■□□□□ 0.7
RPL13A-214ENST00000624069 LMOD1P29536 600 aaPredicted RBP19.43■□□□□ 0.7
RPL13A-214ENST00000624069 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
RPL13A-214ENST00000624069 CA12O43570 354 aa19.42■□□□□ 0.7
RPL13A-214ENST00000624069 KRT24Q2M2I5 525 aa19.42■□□□□ 0.7
RPL13A-214ENST00000624069 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
RPL13A-214ENST00000624069 NIP7Q9Y221 180 aaKnown RBP eCLIP19.42■□□□□ 0.76e-75■□□□□ 10.1
RPL13A-214ENST00000624069 ZNF652Q9Y2D9 606 aa19.42■□□□□ 0.7
RPL13A-214ENST00000624069 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
RPL13A-214ENST00000624069 HOXB7P09629 217 aa19.41■□□□□ 0.7
RPL13A-214ENST00000624069 SAPCD2Q86UD0 394 aa19.41■□□□□ 0.7
RPL13A-214ENST00000624069 FANCIQ9NVI1 1328 aa19.41■□□□□ 0.7
RPL13A-214ENST00000624069 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
RPL13A-214ENST00000624069 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
RPL13A-214ENST00000624069 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
RPL13A-214ENST00000624069 FAM177BA6PVY3 158 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 RGL2O15211 777 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 EIF2S2P20042 333 aaKnown RBP19.39■□□□□ 0.69
RPL13A-214ENST00000624069 DGKZQ13574 1117 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 DUSP27Q5VZP5 1158 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 CC2D2BQ6DHV5 1058 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 COL4A5P29400 1685 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 LTBP1Q14766 1721 aa19.39■□□□□ 0.69
RPL13A-214ENST00000624069 BRPF1P55201 1214 aaPredicted RBP19.38■□□□□ 0.69
RPL13A-214ENST00000624069 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
RPL13A-214ENST00000624069 HDGFL1Q5TGJ6 251 aa19.38■□□□□ 0.69
RPL13A-214ENST00000624069 NBPF26B4DH59 902 aa19.37■□□□□ 0.69
RPL13A-214ENST00000624069 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
RPL13A-214ENST00000624069 GOLGA2Q08379 1002 aa19.37■□□□□ 0.69
RPL13A-214ENST00000624069 NBPF10Q6P3W6 841 aaKnown RBP19.37■□□□□ 0.69
RPL13A-214ENST00000624069 LARGE2Q8N3Y3 721 aa19.37■□□□□ 0.69
RPL13A-214ENST00000624069 NBPF15Q8N660 670 aa19.37■□□□□ 0.69
RPL13A-214ENST00000624069 HHIPL1Q96JK4 782 aa19.37■□□□□ 0.69
RPL13A-214ENST00000624069 CELF2O95319 508 aaKnown RBP19.36■□□□□ 0.69
RPL13A-214ENST00000624069 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
RPL13A-214ENST00000624069 SPINK5Q9NQ38 1064 aaPredicted RBP19.36■□□□□ 0.69
RPL13A-214ENST00000624069 PDE4DIPQ5VU43 2346 aa19.35■□□□□ 0.69
RPL13A-214ENST00000624069 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms