RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 METTL22Q9BUU2 404 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-212ENST00000621813 GLI3P10071 1580 aa21.13■□□□□ 0.97
TRA2A-212ENST00000621813 VGLL3A8MV65 326 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 GLRX3O76003 335 aaKnown RBP21.12■□□□□ 0.97
TRA2A-212ENST00000621813 MCM2P49736 904 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 PLCD3Q8N3E9 789 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 MYL6BP14649 208 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 TOM1L2Q6ZVM7 507 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
TRA2A-212ENST00000621813 TNPO1Q92973 898 aaKnown RBP21.12■□□□□ 0.97
TRA2A-212ENST00000621813 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 IGKV5-2P06315 115 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 ANKRD13DQ6ZTN6 518 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 GAS2L3Q86XJ1 694 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 UNC5CLQ8IV45 518 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
TRA2A-212ENST00000621813 SUCLG2Q96I99 432 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 CWC22Q9HCG8 908 aaKnown RBP21.11■□□□□ 0.97
TRA2A-212ENST00000621813 ANO2Q9NQ90 1003 aa21.11■□□□□ 0.97
TRA2A-212ENST00000621813 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 ERVV-2B6SEH9 535 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 LRP10Q7Z4F1 713 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 GCKRQ14397 625 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 MYRIPQ8NFW9 859 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 CARD10Q9BWT7 1032 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 USP16Q9Y5T5 823 aa21.1■□□□□ 0.97
TRA2A-212ENST00000621813 COL15A1P39059 1388 aa21.09■□□□□ 0.97
TRA2A-212ENST00000621813 SHANK3Q9BYB0 1731 aa21.09■□□□□ 0.97
TRA2A-212ENST00000621813 BICC1Q9H694 974 aaKnown RBP21.09■□□□□ 0.97
TRA2A-212ENST00000621813 NUCB2P80303 420 aa21.08■□□□□ 0.97
TRA2A-212ENST00000621813 HMGN5P82970 282 aaKnown RBP21.08■□□□□ 0.97
TRA2A-212ENST00000621813 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.97
TRA2A-212ENST00000621813 KAZALD1Q96I82 304 aa21.08■□□□□ 0.97
TRA2A-212ENST00000621813 PRIMPOLQ96LW4 560 aa21.08■□□□□ 0.97
TRA2A-212ENST00000621813 ZKSCAN5Q9Y2L8 839 aa21.08■□□□□ 0.97
TRA2A-212ENST00000621813 IFIT2P09913 472 aaKnown RBP21.08■□□□□ 0.96
TRA2A-212ENST00000621813 G3BP1Q13283 466 aaKnown RBP eCLIP21.08■□□□□ 0.96
TRA2A-212ENST00000621813 CLEC17AQ6ZS10 378 aa21.08■□□□□ 0.96
TRA2A-212ENST00000621813 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.96
TRA2A-212ENST00000621813 IL2RBP14784 551 aa21.07■□□□□ 0.96
TRA2A-212ENST00000621813 RGS22Q8NE09 1264 aa21.07■□□□□ 0.96
TRA2A-212ENST00000621813 MYD88Q99836 296 aa21.07■□□□□ 0.96
TRA2A-212ENST00000621813 LTBP4Q8N2S1 1624 aa21.06■□□□□ 0.96
TRA2A-212ENST00000621813 SECISBP2LQ93073 1101 aaKnown RBP21.06■□□□□ 0.96
TRA2A-212ENST00000621813 FOXD4L1Q9NU39 408 aa21.06■□□□□ 0.96
TRA2A-212ENST00000621813 GTF2F1P35269 517 aaKnown RBP eCLIP21.06■□□□□ 0.967e-10■□□□□ 10.7
TRA2A-212ENST00000621813 TSPYL1Q9H0U9 437 aa21.06■□□□□ 0.96
TRA2A-212ENST00000621813 BCCIPQ9P287 314 aaKnown RBP eCLIP21.06■□□□□ 0.96
TRA2A-212ENST00000621813 SGSM2O43147 1006 aa21.05■□□□□ 0.96
TRA2A-212ENST00000621813 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
TRA2A-212ENST00000621813 PA2G4Q9UQ80 394 aaKnown RBP21.05■□□□□ 0.96
TRA2A-212ENST00000621813 NEK4P51957 841 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 PDLIM2Q96JY6 352 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 CCDC66A2RUB6 948 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 GOLGA6L22H0YM25 854 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 HSPA4P34932 840 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 ARID3AQ99856 593 aa21.04■□□□□ 0.96
TRA2A-212ENST00000621813 RAD50Q92878 1312 aa21.03■□□□□ 0.96
TRA2A-212ENST00000621813 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
TRA2A-212ENST00000621813 NUP188Q5SRE5 1749 aa21.03■□□□□ 0.96
TRA2A-212ENST00000621813 CBX1P83916 185 aa21.03■□□□□ 0.96
TRA2A-212ENST00000621813 CGNQ9P2M7 1197 aaKnown RBP21.03■□□□□ 0.96
TRA2A-212ENST00000621813 AACSQ86V21 672 aa21.02■□□□□ 0.96
TRA2A-212ENST00000621813 CCDC39Q9UFE4 941 aa21.02■□□□□ 0.96
TRA2A-212ENST00000621813 SASH1O94885 1247 aa21.02■□□□□ 0.95
TRA2A-212ENST00000621813 MAP4K4O95819 1239 aaPredicted RBP21.02■□□□□ 0.95
TRA2A-212ENST00000621813 EVI5LQ96CN4 794 aa21.02■□□□□ 0.95
TRA2A-212ENST00000621813 EVA1CP58658 441 aa21.01■□□□□ 0.95
TRA2A-212ENST00000621813 HIP1O00291 1037 aa21■□□□□ 0.95
TRA2A-212ENST00000621813 GABPB1Q06547 395 aaPredicted RBP21■□□□□ 0.95
TRA2A-212ENST00000621813 RABL6Q3YEC7 729 aaPredicted RBP21■□□□□ 0.95
TRA2A-212ENST00000621813 COPRSQ9NQ92 184 aa21■□□□□ 0.95
TRA2A-212ENST00000621813 DIAPH3Q9NSV4 1193 aa21■□□□□ 0.95
TRA2A-212ENST00000621813 PALD1Q9ULE6 856 aa21■□□□□ 0.95
TRA2A-212ENST00000621813 TNS2Q63HR2 1409 aa21■□□□□ 0.95
TRA2A-212ENST00000621813 CYP2E1P05181 493 aaPredicted RBP21■□□□□ 0.95
TRA2A-212ENST00000621813 IRX5P78411 483 aaPredicted RBP21■□□□□ 0.95
TRA2A-212ENST00000621813 SSFA2P28290 1259 aa20.99■□□□□ 0.95
TRA2A-212ENST00000621813 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.99■□□□□ 0.95
TRA2A-212ENST00000621813 INTS4Q96HW7 963 aaKnown RBP20.98■□□□□ 0.95
TRA2A-212ENST00000621813 TMX3Q96JJ7 454 aa20.98■□□□□ 0.95
TRA2A-212ENST00000621813 IL25Q9H293 177 aa20.98■□□□□ 0.95
TRA2A-212ENST00000621813 MMP14P50281 582 aa20.98■□□□□ 0.95
TRA2A-212ENST00000621813 CUL4AQ13619 759 aa20.98■□□□□ 0.95
TRA2A-212ENST00000621813 EAF2Q96CJ1 260 aaPredicted RBP20.98■□□□□ 0.95
TRA2A-212ENST00000621813 FEZ1Q99689 392 aa20.98■□□□□ 0.95
TRA2A-212ENST00000621813 LSG1Q9H089 658 aaKnown RBP20.98■□□□□ 0.95
TRA2A-212ENST00000621813 RNF216Q9NWF9 866 aaPredicted RBP20.98■□□□□ 0.95
TRA2A-212ENST00000621813 TOGARAM1Q9Y4F4 1720 aa20.97■□□□□ 0.95
TRA2A-212ENST00000621813 ZNF445P59923 1031 aa20.97■□□□□ 0.95
TRA2A-212ENST00000621813 CWC27Q6UX04 472 aaKnown RBP20.97■□□□□ 0.95
TRA2A-212ENST00000621813 YY1AP1Q9H869 796 aa20.97■□□□□ 0.95
TRA2A-212ENST00000621813 STRN4Q9NRL3 753 aa20.97■□□□□ 0.95
TRA2A-212ENST00000621813 A0A087WZG4 1122 aa20.96■□□□□ 0.95
TRA2A-212ENST00000621813 ZNF771Q7L3S4 317 aaPredicted RBP20.96■□□□□ 0.95
TRA2A-212ENST00000621813 UBE3BQ7Z3V4 1068 aa20.96■□□□□ 0.95
TRA2A-212ENST00000621813 COL14A1Q05707 1796 aaKnown RBP20.96■□□□□ 0.95
TRA2A-212ENST00000621813 NBPF26B4DH59 902 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms