RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 NEURL1BA8MQ27 555 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 PRPF40AO75400 957 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 GLRX3O76003 335 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 CPA1P15085 419 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 CASP7P55210 303 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 XPCQ01831 940 aaPredicted RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 TEFQ10587 303 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 NECTIN1Q15223 517 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 CWF19L2Q2TBE0 894 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 ADCK5Q3MIX3 580 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 CCDC88AQ3V6T2 1871 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 RABL6Q3YEC7 729 aaPredicted RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 HSP90AB4PQ58FF6 505 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 ESCO1Q5FWF5 840 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 EPHA10Q5JZY3 1008 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 NOL8Q76FK4 1167 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 C14orf37Q86TY3 774 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 ZSCAN30Q86W11 494 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 CNTROBQ8N137 903 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 LINS1Q8NG48 757 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 EAF2Q96CJ1 260 aaPredicted RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 FUCA2Q9BTY2 467 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 BICC1Q9H694 974 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 SLC52A2Q9HAB3 445 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 ZSWIM6Q9HCJ5 1215 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 HYPKQ9NX55 129 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 BAZ2BQ9UIF8 2168 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 SPG7Q9UQ90 795 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 MTMR6Q9Y217 621 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 TAF6LQ9Y6J9 622 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 MAST2Q6P0Q8 1798 aa3.91□□□□□ -1.78
U1.39-201ENST00000621562 COL5A2P05997 1499 aaPredicted RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 WDR33Q9C0J8 1336 aaKnown RBP3.91□□□□□ -1.78
U1.39-201ENST00000621562 ZNF831Q5JPB2 1677 aa3.9□□□□□ -1.78
U1.39-201ENST00000621562 SLIT2O94813 1529 aa3.9□□□□□ -1.78
U1.39-201ENST00000621562 PALLDQ8WX93 1383 aa3.9□□□□□ -1.78
U1.39-201ENST00000621562 RIC1Q4ADV7 1423 aa3.9□□□□□ -1.78
U1.39-201ENST00000621562 A0A0D9SFI3 127 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 SYCE3A1L190 88 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 GRM8O00222 908 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 CYP27B1O15528 508 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 ZNF500O60304 480 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 OFD1O75665 1012 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 F13A1P00488 732 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 ZSCAN22P10073 491 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 PHKG2P15735 406 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 SYT1P21579 422 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 PSME1Q06323 249 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 NMIQ13287 307 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 C1orf141Q5JVX7 400 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 VPS53Q5VIR6 699 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 FOXD4L5Q5VV16 416 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 KRT28Q7Z3Y7 464 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 USP48Q86UV5 1035 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 ERC1Q8IUD2 1116 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 FOXD4L4Q8WXT5 416 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 MAP4K1Q92918 833 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 FAM227BQ96M60 508 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 CHMP4AQ9BY43 222 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 ALDH8A1Q9H2A2 487 aaPredicted RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 ECHDC1Q9NTX5 307 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.9□□□□□ -1.79
U1.39-201ENST00000621562 NOL7Q9UMY1 257 aaKnown RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 CNPY2Q9Y2B0 182 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 RBM8AQ9Y5S9 174 aaKnown RBP3.9□□□□□ -1.79
U1.39-201ENST00000621562 TAF1LQ8IZX4 1826 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 COL4A1P02462 1669 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 COL24A1Q17RW2 1714 aa3.9□□□□□ -1.79
U1.39-201ENST00000621562 MYH7BA7E2Y1 1941 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 SLC27A2O14975 620 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 AP5Z1O43299 807 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 STX6O43752 255 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CASTP20810 708 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 PTPN12Q05209 780 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 SLC39A6Q13433 755 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 TOB2Q14106 344 aaPredicted RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 GCKRQ14397 625 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 ME3Q16798 604 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 TSGA10IPQ3SY00 556 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CCDC183Q5T5S1 534 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 USPL1Q5W0Q7 1092 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CREB3L3Q68CJ9 461 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 PRPF40BQ6NWY9 871 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 ZNF790Q6PG37 636 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CWC27Q6UX04 472 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 ZNF589Q86UQ0 364 aaPredicted RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 AACSQ86V21 672 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 CCDC83Q8IWF9 413 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 KLHL34Q8N239 644 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 KLHDC4Q8TBB5 520 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 XAGE3Q8WTP9 111 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 EVI5LQ96CN4 794 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 ZNF496Q96IT1 587 aaPredicted RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 JAKMIP1Q96N16 626 aaKnown RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 METTL22Q9BUU2 404 aaPredicted RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 TSPY26PQ9H489 355 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 GDPD2Q9HCC8 539 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 COPRSQ9NQ92 184 aa3.89□□□□□ -1.79
U1.39-201ENST00000621562 SH2B1Q9NRF2 756 aaPredicted RBP3.89□□□□□ -1.79
U1.39-201ENST00000621562 DIAPH3Q9NSV4 1193 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms