RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 ANKS4BQ8N8V4 417 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 PPP1R14CQ8TAE6 165 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 LRPPRCP42704 1394 aaKnown RBP11.37□□□□□ -0.59
COL4A6-210ENST00000621266 GOLGA6L9A6NEM1 432 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 HCLS1P14317 486 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-210ENST00000621266 NOP2P46087 812 aaKnown RBP11.37□□□□□ -0.59
COL4A6-210ENST00000621266 KCNH5Q8NCM2 988 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 TSG101Q99816 390 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 NBPF11Q86T75 865 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 FSIP1Q8NA03 581 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
COL4A6-210ENST00000621266 PSMD1Q99460 953 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 SELENOSQ9BQE4 189 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 CNNM3Q8NE01 707 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
COL4A6-210ENST00000621266 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 NACAP1Q9BZK3 213 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 CTNNA2P26232 953 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 CLNS1AP54105 237 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 PRPF40BQ6NWY9 871 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 GIMAP6Q6P9H5 292 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 ASXL2Q76L83 1435 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 CTAGE5O15320 804 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 CCDC155Q8N6L0 562 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 TFIP11Q9UBB9 837 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 NOL3O60936 208 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
COL4A6-210ENST00000621266 FERP16591 822 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 OGFRQ9NZT2 677 aa11.36□□□□□ -0.59
COL4A6-210ENST00000621266 CTAGE15A4D2H0 777 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 CTAGE8P0CG41 777 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 CTAGE6Q86UF2 777 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 CTAGE4Q8IX94 777 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 WASF1Q92558 559 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 UBAC1Q9BSL1 405 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 PPP1R12BO60237 982 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-210ENST00000621266 ZNF165P49910 485 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 PEG3Q9GZU2 1588 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 MYO1BO43795 1136 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-210ENST00000621266 OPA1O60313 960 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 TMCO4Q5TGY1 634 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 KIF3CO14782 793 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 SKILP12757 684 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 RFC4P35249 363 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 USP5P45974 858 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 KRT32Q14532 448 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 CABLES1Q8TDN4 633 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 ZNF76P36508 570 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 CKAP4Q07065 602 aaKnown RBP11.35□□□□□ -0.59
COL4A6-210ENST00000621266 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
COL4A6-210ENST00000621266 TTC12Q9H892 705 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-210ENST00000621266 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 TNRQ92752 1358 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 A0A1B0GUA9 196 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 DDX19AQ9NUU7 478 aaKnown RBP11.34□□□□□ -0.59
COL4A6-210ENST00000621266 FAM135AQ9P2D6 1515 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 SLU7O95391 586 aaKnown RBP11.34□□□□□ -0.59
COL4A6-210ENST00000621266 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
COL4A6-210ENST00000621266 CCDC186Q7Z3E2 898 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-210ENST00000621266 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 FAM114A2Q9NRY5 505 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 TERF1P54274 439 aa11.34□□□□□ -0.59
COL4A6-210ENST00000621266 SMIM23A6NLE4 172 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 ZWINTO95229 277 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 SPTY2D1Q68D10 685 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-210ENST00000621266 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 COMMD10Q9Y6G5 202 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 ZBTB16Q05516 673 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 CEP120Q8N960 986 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 C8orf76Q96K31 380 aa11.33□□□□□ -0.6
COL4A6-210ENST00000621266 FEZ2Q9UHY8 353 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-210ENST00000621266 IGHMBP2P38935 993 aaKnown RBP11.32□□□□□ -0.6
COL4A6-210ENST00000621266 PDE1CQ14123 709 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-210ENST00000621266 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 ZKSCAN5Q9Y2L8 839 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 IKBKGQ9Y6K9 419 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 GJB2P29033 226 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 TMPOP42166 694 aaKnown RBP11.32□□□□□ -0.6
COL4A6-210ENST00000621266 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 RPUSD2Q8IZ73 545 aaKnown RBP11.32□□□□□ -0.6
COL4A6-210ENST00000621266 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 IDI1Q13907 227 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 KLHL40Q2TBA0 621 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 CFAP58Q5T655 872 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
COL4A6-210ENST00000621266 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
COL4A6-210ENST00000621266 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms