RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 HOXA10P31260 410 aaPredicted RBP28.13■■■□□ 2.09
KCNMA1-224ENST00000618048 FZD9O00144 591 aa28.12■■■□□ 2.09
KCNMA1-224ENST00000618048 EAPPQ56P03 285 aaPredicted RBP28.12■■■□□ 2.09
KCNMA1-224ENST00000618048 JDP2Q8WYK2 163 aa28.12■■■□□ 2.09
KCNMA1-224ENST00000618048 LMOD3Q0VAK6 560 aa28.11■■■□□ 2.09
KCNMA1-224ENST00000618048 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
KCNMA1-224ENST00000618048 PPP1R42Q7Z4L9 355 aa28.11■■■□□ 2.09
KCNMA1-224ENST00000618048 BABAM1Q9NWV8 329 aa28.11■■■□□ 2.09
KCNMA1-224ENST00000618048 EIF2S2P20042 333 aaKnown RBP28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 LRP10Q7Z4F1 713 aa28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 RBM17Q96I25 401 aaKnown RBP28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 MKRN1Q9UHC7 482 aaKnown RBP28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 RNF123Q5XPI4 1314 aa28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 PASKQ96RG2 1323 aa28.1■■■□□ 2.09
KCNMA1-224ENST00000618048 EPHX2P34913 555 aa28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 TMPOP42166 694 aaKnown RBP28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 PDIA6Q15084 440 aa28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 GRIPAP1Q4V328 841 aa28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 GPC2Q8N158 579 aa28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 CRAMP1Q96RY5 1269 aa28.09■■■□□ 2.09
KCNMA1-224ENST00000618048 ADAMTSL1Q8N6G6 1762 aa28.08■■■□□ 2.09
KCNMA1-224ENST00000618048 PCNTO95613 3336 aa28.08■■■□□ 2.09
KCNMA1-224ENST00000618048 COL4A5P29400 1685 aa28.07■■■□□ 2.08
KCNMA1-224ENST00000618048 PPEF1O14829 653 aaPredicted RBP28.07■■■□□ 2.08
KCNMA1-224ENST00000618048 PNMA8AQ86V59 439 aaPredicted RBP28.07■■■□□ 2.08
KCNMA1-224ENST00000618048 EIF6P56537 245 aaKnown RBP28.06■■■□□ 2.08
KCNMA1-224ENST00000618048 PROSER3Q2NL68 480 aa28.06■■■□□ 2.08
KCNMA1-224ENST00000618048 C3orf67Q6ZVT6 689 aa28.06■■■□□ 2.08
KCNMA1-224ENST00000618048 TNS4Q8IZW8 715 aa28.06■■■□□ 2.08
KCNMA1-224ENST00000618048 CLEC11AQ9Y240 323 aa28.06■■■□□ 2.08
KCNMA1-224ENST00000618048 ANXA1P04083 346 aa28.05■■■□□ 2.08
KCNMA1-224ENST00000618048 CNTNAP1P78357 1384 aa28.05■■■□□ 2.08
KCNMA1-224ENST00000618048 NLRP3Q96P20 1036 aa28.05■■■□□ 2.08
KCNMA1-224ENST00000618048 MYBBP1AQ9BQG0 1328 aaKnown RBP28.04■■■□□ 2.08
KCNMA1-224ENST00000618048 ITGBL1O95965 494 aaPredicted RBP28.04■■■□□ 2.08
KCNMA1-224ENST00000618048 LARGE2Q8N3Y3 721 aa28.04■■■□□ 2.08
KCNMA1-224ENST00000618048 UTP14AQ9BVJ6 771 aaKnown RBP28.04■■■□□ 2.08
KCNMA1-224ENST00000618048 TCERG1O14776 1098 aaKnown RBP28.03■■■□□ 2.08
KCNMA1-224ENST00000618048 SLC51AQ86UW1 340 aa28.03■■■□□ 2.08
KCNMA1-224ENST00000618048 ANKRD36CQ5JPF3 1778 aa28.03■■■□□ 2.08
KCNMA1-224ENST00000618048 TMEM88BA6NKF7 163 aa28.02■■■□□ 2.08
KCNMA1-224ENST00000618048 NECTIN2Q92692 538 aa28.02■■■□□ 2.08
KCNMA1-224ENST00000618048 GJA3Q9Y6H8 435 aa28.02■■■□□ 2.08
KCNMA1-224ENST00000618048 HSP90AB3PQ58FF7 597 aa28.01■■■□□ 2.07
KCNMA1-224ENST00000618048 SLC10A5Q5PT55 438 aa28.01■■■□□ 2.07
KCNMA1-224ENST00000618048 CCDC146Q8IYE0 955 aa28.01■■■□□ 2.07
KCNMA1-224ENST00000618048 TMX4Q9H1E5 349 aaPredicted RBP28.01■■■□□ 2.07
KCNMA1-224ENST00000618048 LMOD1P29536 600 aaPredicted RBP28■■■□□ 2.07
KCNMA1-224ENST00000618048 AIMP1Q12904 312 aaKnown RBP28■■■□□ 2.07
KCNMA1-224ENST00000618048 NEUROD2Q15784 382 aa28■■■□□ 2.07
KCNMA1-224ENST00000618048 COPS6Q7L5N1 327 aa28■■■□□ 2.07
KCNMA1-224ENST00000618048 XAGE3Q8WTP9 111 aa28■■■□□ 2.07
KCNMA1-224ENST00000618048 MAP1SQ66K74 1059 aaPredicted RBP27.99■■■□□ 2.07
KCNMA1-224ENST00000618048 NIM1KQ8IY84 436 aa27.99■■■□□ 2.07
KCNMA1-224ENST00000618048 CNTROBQ8N137 903 aa27.99■■■□□ 2.07
KCNMA1-224ENST00000618048 ATP6V0A2Q9Y487 856 aa27.99■■■□□ 2.07
KCNMA1-224ENST00000618048 DDX10Q13206 875 aaKnown RBP27.98■■■□□ 2.07
KCNMA1-224ENST00000618048 DDX21Q9NR30 783 aaKnown RBP eCLIP27.98■■■□□ 2.07
KCNMA1-224ENST00000618048 LTBP1Q14766 1721 aa27.98■■■□□ 2.07
KCNMA1-224ENST00000618048 ABCC4O15439 1325 aa27.97■■■□□ 2.07
KCNMA1-224ENST00000618048 CHL1O00533 1208 aa27.97■■■□□ 2.07
KCNMA1-224ENST00000618048 PPIP5K2O43314 1243 aa27.97■■■□□ 2.07
KCNMA1-224ENST00000618048 WDR43Q15061 677 aaKnown RBP eCLIP27.97■■■□□ 2.07
KCNMA1-224ENST00000618048 NLRP10Q86W26 655 aa27.97■■■□□ 2.07
KCNMA1-224ENST00000618048 KRT24Q2M2I5 525 aa27.96■■■□□ 2.07
KCNMA1-224ENST00000618048 RUNDC1Q96C34 613 aa27.96■■■□□ 2.07
KCNMA1-224ENST00000618048 LAMB2P55268 1798 aa27.96■■■□□ 2.07
KCNMA1-224ENST00000618048 CAPN15O75808 1086 aa27.95■■■□□ 2.06
KCNMA1-224ENST00000618048 SCNN1DP51172 638 aa27.95■■■□□ 2.06
KCNMA1-224ENST00000618048 AOC3Q16853 763 aa27.95■■■□□ 2.06
KCNMA1-224ENST00000618048 LAS1LQ9Y4W2 734 aaKnown RBP27.95■■■□□ 2.06
KCNMA1-224ENST00000618048 HCLS1P14317 486 aaPredicted RBP27.94■■■□□ 2.06
KCNMA1-224ENST00000618048 TCIRG1Q13488 830 aa27.94■■■□□ 2.06
KCNMA1-224ENST00000618048 SUPT20HQ8NEM7 779 aa27.94■■■□□ 2.06
KCNMA1-224ENST00000618048 VPS33BQ9H267 617 aa27.94■■■□□ 2.06
KCNMA1-224ENST00000618048 TRIM35Q9UPQ4 493 aa27.94■■■□□ 2.06
KCNMA1-224ENST00000618048 VEGFBP49765 207 aa27.93■■■□□ 2.06
KCNMA1-224ENST00000618048 CHPF2Q9P2E5 772 aa27.93■■■□□ 2.06
KCNMA1-224ENST00000618048 TRMT112Q9UI30 125 aaKnown RBP27.93■■■□□ 2.06
KCNMA1-224ENST00000618048 SH3TC1Q8TE82 1336 aa27.92■■■□□ 2.06
KCNMA1-224ENST00000618048 BBOX1O75936 387 aa27.92■■■□□ 2.06
KCNMA1-224ENST00000618048 EPS15P42566 896 aa27.92■■■□□ 2.06
KCNMA1-224ENST00000618048 RTFDC1Q9BY42 306 aaPredicted RBP27.92■■■□□ 2.06
KCNMA1-224ENST00000618048 HDGFL1Q5TGJ6 251 aa27.91■■■□□ 2.06
KCNMA1-224ENST00000618048 DPP8Q6V1X1 898 aaPredicted RBP27.91■■■□□ 2.06
KCNMA1-224ENST00000618048 DDX46Q7L014 1031 aaKnown RBP27.91■■■□□ 2.06
KCNMA1-224ENST00000618048 RASSF10A6NK89 507 aa27.9■■■□□ 2.06
KCNMA1-224ENST00000618048 FOXN1O15353 648 aa27.9■■■□□ 2.06
KCNMA1-224ENST00000618048 HOXB7P09629 217 aa27.9■■■□□ 2.06
KCNMA1-224ENST00000618048 SP8Q8IXZ3 490 aa27.9■■■□□ 2.06
KCNMA1-224ENST00000618048 USP50Q70EL3 339 aaPredicted RBP27.89■■■□□ 2.06
KCNMA1-224ENST00000618048 MPNDQ8N594 471 aa27.89■■■□□ 2.06
KCNMA1-224ENST00000618048 AIDAQ96BJ3 306 aa27.89■■■□□ 2.06
KCNMA1-224ENST00000618048 ZNRF3Q9ULT6 936 aa27.89■■■□□ 2.06
KCNMA1-224ENST00000618048 GRAPQ13588 217 aa27.88■■■□□ 2.05
KCNMA1-224ENST00000618048 PLBD2Q8NHP8 589 aa27.88■■■□□ 2.05
KCNMA1-224ENST00000618048 GRAPLQ8TC17 118 aaPredicted RBP27.88■■■□□ 2.05
KCNMA1-224ENST00000618048 ABT1Q9ULW3 272 aaKnown RBP27.88■■■□□ 2.05
KCNMA1-224ENST00000618048 ADAMTS8Q9UP79 889 aa27.88■■■□□ 2.05
KCNMA1-224ENST00000618048 DEFB115Q30KQ5 88 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms