RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 MYRIPQ8NFW9 859 aa20.85■□□□□ 0.93
DDX1-207ENST00000617198 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
DDX1-207ENST00000617198 TPCN1Q9ULQ1 816 aa20.85■□□□□ 0.93
DDX1-207ENST00000617198 DDX54Q8TDD1 881 aaKnown RBP20.85■□□□□ 0.93
DDX1-207ENST00000617198 LRRC59Q96AG4 307 aaKnown RBP20.85■□□□□ 0.93
DDX1-207ENST00000617198 PRIMPOLQ96LW4 560 aa20.85■□□□□ 0.93
DDX1-207ENST00000617198 SNRKQ9NRH2 765 aa20.85■□□□□ 0.93
DDX1-207ENST00000617198 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 NMIQ13287 307 aaPredicted RBP20.84■□□□□ 0.93
DDX1-207ENST00000617198 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 LARP1BQ659C4 914 aaKnown RBP20.84■□□□□ 0.93
DDX1-207ENST00000617198 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 PHRF1Q9P1Y6 1649 aaKnown RBP20.84■□□□□ 0.93
DDX1-207ENST00000617198 GRM8O00222 908 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 SASH1O94885 1247 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 LINS1Q8NG48 757 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 SPTLC3Q9NUV7 552 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 OVOS2A0A0G2JMS6 1433 aa20.84■□□□□ 0.93
DDX1-207ENST00000617198 SLC27A2O14975 620 aa20.83■□□□□ 0.93
DDX1-207ENST00000617198 CCDC192P0DO97 292 aa20.83■□□□□ 0.93
DDX1-207ENST00000617198 KRT85P78386 507 aa20.83■□□□□ 0.93
DDX1-207ENST00000617198 PLCB2Q00722 1185 aa20.83■□□□□ 0.93
DDX1-207ENST00000617198 G3BP1Q13283 466 aaKnown RBP eCLIP20.83■□□□□ 0.931e-6■■■□□ 18.3
DDX1-207ENST00000617198 EAF2Q96CJ1 260 aaPredicted RBP20.83■□□□□ 0.93
DDX1-207ENST00000617198 SUCLG2Q96I99 432 aa20.83■□□□□ 0.93
DDX1-207ENST00000617198 UTYO14607 1347 aa20.83■□□□□ 0.92
DDX1-207ENST00000617198 HMGN5P82970 282 aaKnown RBP20.83■□□□□ 0.92
DDX1-207ENST00000617198 PDCP20941 246 aa20.82■□□□□ 0.92
DDX1-207ENST00000617198 ANKRD1Q15327 319 aa20.82■□□□□ 0.92
DDX1-207ENST00000617198 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
DDX1-207ENST00000617198 BICC1Q9H694 974 aaKnown RBP20.82■□□□□ 0.92
DDX1-207ENST00000617198 PXDNQ92626 1479 aa20.82■□□□□ 0.92
DDX1-207ENST00000617198 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 TTC6Q86TZ1 520 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 CCDC8Q9H0W5 538 aaPredicted RBP20.81■□□□□ 0.92
DDX1-207ENST00000617198 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.81■□□□□ 0.92
DDX1-207ENST00000617198 ELP1O95163 1332 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 AP5Z1O43299 807 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 CDC37L1Q7L3B6 337 aa20.81■□□□□ 0.92
DDX1-207ENST00000617198 DDX58O95786 925 aaKnown RBP20.8■□□□□ 0.92
DDX1-207ENST00000617198 TPM3P06753 285 aa20.8■□□□□ 0.92
DDX1-207ENST00000617198 PSME1Q06323 249 aa20.8■□□□□ 0.92
DDX1-207ENST00000617198 C17orf53Q8N3J3 647 aaPredicted RBP20.8■□□□□ 0.92
DDX1-207ENST00000617198 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
DDX1-207ENST00000617198 PRAMEF22A3QJZ6 481 aa20.8■□□□□ 0.92
DDX1-207ENST00000617198 ALDH8A1Q9H2A2 487 aaPredicted RBP20.8■□□□□ 0.92
DDX1-207ENST00000617198 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
DDX1-207ENST00000617198 FSD1Q9BTV5 496 aa20.79■□□□□ 0.92
DDX1-207ENST00000617198 NPHP4O75161 1426 aaPredicted RBP20.79■□□□□ 0.92
DDX1-207ENST00000617198 NUP62CLQ9H1M0 184 aa20.79■□□□□ 0.92
DDX1-207ENST00000617198 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
DDX1-207ENST00000617198 TLR7Q9NYK1 1049 aaKnown RBP20.79■□□□□ 0.92
DDX1-207ENST00000617198 MED23Q9ULK4 1368 aa20.78■□□□□ 0.92
DDX1-207ENST00000617198 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
DDX1-207ENST00000617198 GTF2F1P35269 517 aaKnown RBP eCLIP20.78■□□□□ 0.92
DDX1-207ENST00000617198 COL9A3Q14050 684 aaPredicted RBP20.78■□□□□ 0.92
DDX1-207ENST00000617198 MAP3K11Q16584 847 aa20.78■□□□□ 0.92
DDX1-207ENST00000617198 FERMT3Q86UX7 667 aa20.78■□□□□ 0.92
DDX1-207ENST00000617198 FAM200AQ8TCP9 573 aa20.78■□□□□ 0.92
DDX1-207ENST00000617198 DDX21Q9NR30 783 aaKnown RBP eCLIP20.78■□□□□ 0.92
DDX1-207ENST00000617198 GOLGA6L6A8MZA4 724 aa20.77■□□□□ 0.92
DDX1-207ENST00000617198 KIAA1524Q8TCG1 905 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 SCAND2PQ9GZW5 306 aaPredicted RBP20.76■□□□□ 0.91
DDX1-207ENST00000617198 HMG20BQ9P0W2 317 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 LIG1P18858 919 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 AIMP1Q12904 312 aaKnown RBP20.76■□□□□ 0.91
DDX1-207ENST00000617198 TOB2Q14106 344 aaPredicted RBP20.76■□□□□ 0.91
DDX1-207ENST00000617198 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 TCEANC2Q96MN5 208 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 SIL1Q9H173 461 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 KCNF1Q9H3M0 494 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 SIPA1L3O60292 1781 aaPredicted RBP20.76■□□□□ 0.91
DDX1-207ENST00000617198 JCADQ9P266 1359 aa20.76■□□□□ 0.91
DDX1-207ENST00000617198 TYRO3Q06418 890 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 CHMP3Q9Y3E7 222 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 PKNOX2Q96KN3 472 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
DDX1-207ENST00000617198 IGKV5-2P06315 115 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 CAMK4Q16566 473 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 SPC24Q8NBT2 197 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 TAF6LQ9Y6J9 622 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 MRC1P22897 1456 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 GCP02774 474 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 PDIA6Q15084 440 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
DDX1-207ENST00000617198 ZNF589Q86UQ0 364 aaPredicted RBP20.74■□□□□ 0.91
DDX1-207ENST00000617198 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
DDX1-207ENST00000617198 GOLGA6L4A6NEF3 574 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 RIC3Q7Z5B4 369 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 ANKRD24Q8TF21 1146 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 TNMDQ9H2S6 317 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 PYCARDQ9ULZ3 195 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 NPHP3Q7Z494 1330 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 DDX19AQ9NUU7 478 aaKnown RBP20.73■□□□□ 0.91
DDX1-207ENST00000617198 DACT1Q9NYF0 836 aa20.73■□□□□ 0.91
DDX1-207ENST00000617198 KLHDC4Q8TBB5 520 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms