RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
ATXN2-227ENST00000616825 MCM5P33992 734 aa20.44■□□□□ 0.86
ATXN2-227ENST00000616825 RFC4P35249 363 aa20.44■□□□□ 0.86
ATXN2-227ENST00000616825 GSTTP1A0A1W2PQM5 241 aa20.44■□□□□ 0.86
ATXN2-227ENST00000616825 TCERG1LQ5VWI1 586 aa20.44■□□□□ 0.86
ATXN2-227ENST00000616825 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 KANK3Q6NY19 840 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
ATXN2-227ENST00000616825 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 GSDMDP57764 484 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 CCDC152Q4G0S7 254 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 CRNKL1Q9BZJ0 848 aaKnown RBP20.43■□□□□ 0.86
ATXN2-227ENST00000616825 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 CCDC144CPQ8IYA2 1237 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 BRF1Q92994 677 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 CALRP27797 417 aaKnown RBP20.43■□□□□ 0.86
ATXN2-227ENST00000616825 ANAPC15P60006 121 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 COPS6Q7L5N1 327 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 MEIS3Q99687 375 aa20.43■□□□□ 0.86
ATXN2-227ENST00000616825 CCDC40Q4G0X9 1142 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 STXBP4Q6ZWJ1 553 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 JARID2Q92833 1246 aaPredicted RBP20.42■□□□□ 0.86
ATXN2-227ENST00000616825 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 XAGE3Q8WTP9 111 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 PLCD4Q9BRC7 762 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 CCDC150Q8NCX0 1101 aa20.42■□□□□ 0.86
ATXN2-227ENST00000616825 MACROD2A1Z1Q3 448 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 ZSCAN16Q9H4T2 348 aaPredicted RBP20.41■□□□□ 0.86
ATXN2-227ENST00000616825 RPRD2Q5VT52 1461 aaKnown RBP20.41■□□□□ 0.86
ATXN2-227ENST00000616825 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 ZCRB1Q8TBF4 217 aaKnown RBP20.41■□□□□ 0.86
ATXN2-227ENST00000616825 STX1AQ16623 288 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 FBLN1P23142 703 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
ATXN2-227ENST00000616825 DYDC1Q8WWB3 177 aa20.41■□□□□ 0.86
ATXN2-227ENST00000616825 MCM3P25205 808 aa20.4■□□□□ 0.86
ATXN2-227ENST00000616825 UBE2HP62256 183 aa20.4■□□□□ 0.86
ATXN2-227ENST00000616825 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
ATXN2-227ENST00000616825 TRMT1LQ7Z2T5 733 aaKnown RBP20.4■□□□□ 0.86
ATXN2-227ENST00000616825 USP8P40818 1118 aa20.4■□□□□ 0.86
ATXN2-227ENST00000616825 DNA2P51530 1060 aa20.4■□□□□ 0.86
ATXN2-227ENST00000616825 HOOK3Q86VS8 718 aa20.4■□□□□ 0.86
ATXN2-227ENST00000616825 WTAPQ15007 396 aa20.39■□□□□ 0.86
ATXN2-227ENST00000616825 LMBR1LQ6UX01 489 aa20.39■□□□□ 0.86
ATXN2-227ENST00000616825 TBC1D32Q96NH3 1257 aa20.39■□□□□ 0.86
ATXN2-227ENST00000616825 NPHP3Q7Z494 1330 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 KLF18A0A0U1RQI7 1052 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 TRAF1Q13077 416 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■■□□□ 12.6
ATXN2-227ENST00000616825 CHPF2Q9P2E5 772 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 CASQ1P31415 396 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 GRM8O00222 908 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 IGHDP01880 384 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 CCDC113Q9H0I3 377 aa20.39■□□□□ 0.85
ATXN2-227ENST00000616825 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.85
ATXN2-227ENST00000616825 TNNT1P13805 278 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 SDSP20132 328 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 ESR2Q92731 530 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 LRRC27Q9C0I9 530 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 ZBTB43O43298 467 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 GSTO1P78417 241 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 SPECC1Q5M775 1068 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 RAB11FIP4Q86YS3 637 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.38■□□□□ 0.854e-6■□□□□ 8.1
ATXN2-227ENST00000616825 BMP15O95972 392 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
ATXN2-227ENST00000616825 IL15P40933 162 aaPredicted RBP20.37■□□□□ 0.85
ATXN2-227ENST00000616825 PDE1AP54750 535 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 FAM114A1Q8IWE2 563 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 CTNNBL1Q8WYA6 563 aaPredicted RBP20.37■□□□□ 0.85
ATXN2-227ENST00000616825 FANCAO15360 1455 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 CCDC178Q5BJE1 867 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 KRT23Q9C075 422 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 IFFO1Q0D2I5 559 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 TMC6Q7Z403 805 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 CCDC91Q7Z6B0 441 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
ATXN2-227ENST00000616825 PTPN23Q9H3S7 1636 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 LIG1P18858 919 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 CYP7A1P22680 504 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 GNAQP50148 359 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 NUCB1Q02818 461 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 TMX3Q96JJ7 454 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 TNRQ92752 1358 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 NAA15Q9BXJ9 866 aaKnown RBP20.36■□□□□ 0.85
ATXN2-227ENST00000616825 KIF14Q15058 1648 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 GOLGA6L9A6NEM1 432 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 MYO1BO43795 1136 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 SYCP3Q8IZU3 236 aa20.36■□□□□ 0.85
ATXN2-227ENST00000616825 LINS1Q8NG48 757 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms