RNA–Protein interactions for RNA: ENST00000616094.1

CREB3L1-205, Transcript of cAMP responsive element binding protein 3 like 1, humanhuman

TSL 1 (best)

Gene CREB3L1, Length 1,817 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L1-205ENST00000616094 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 PROSER3Q2NL68 480 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 MYRIPQ8NFW9 859 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 MAP4K1Q92918 833 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 FAM13BQ9NYF5 915 aa16.08■□□□□ 0.17
CREB3L1-205ENST00000616094 MED23Q9ULK4 1368 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 VPS37CA5D8V6 355 aaPredicted RBP16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 SLC27A2O14975 620 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 PSMA5P28066 241 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 GIMAP6Q6P9H5 292 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 SUCLG2Q96I99 432 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 PRIMPOLQ96LW4 560 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 TPCN1Q9ULQ1 816 aa16.08■□□□□ 0.16
CREB3L1-205ENST00000616094 ELP1O95163 1332 aa16.07■□□□□ 0.16
CREB3L1-205ENST00000616094 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
CREB3L1-205ENST00000616094 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CREB3L1-205ENST00000616094 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
CREB3L1-205ENST00000616094 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
CREB3L1-205ENST00000616094 GRM8O00222 908 aa16.06■□□□□ 0.16
CREB3L1-205ENST00000616094 SASH1O94885 1247 aa16.06■□□□□ 0.16
CREB3L1-205ENST00000616094 CWF19L2Q2TBE0 894 aaKnown RBP16.06■□□□□ 0.16
CREB3L1-205ENST00000616094 FAM227BQ96M60 508 aa16.06■□□□□ 0.16
CREB3L1-205ENST00000616094 TPM3P06753 285 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 KRT85P78386 507 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 NECAB1Q8N987 351 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 KAZALD1Q96I82 304 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 CCDC192P0DO97 292 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 PDCP20941 246 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 KCNJ4P48050 445 aa16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 EAF2Q96CJ1 260 aaPredicted RBP16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 TTC12Q9H892 705 aaPredicted RBP16.05■□□□□ 0.16
CREB3L1-205ENST00000616094 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 DDX58O95786 925 aaKnown RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 HMGN5P82970 282 aaKnown RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 TPRNQ4KMQ1 711 aa16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 TTC6Q86TZ1 520 aa16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 BICC1Q9H694 974 aaKnown RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
CREB3L1-205ENST00000616094 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 AP5Z1O43299 807 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 DNTTIP2Q5QJE6 756 aaKnown RBP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 MPNDQ8N594 471 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 DDX21Q9NR30 783 aaKnown RBP eCLIP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 HMG20BQ9P0W2 317 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 MYH15Q9Y2K3 1946 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 RFX7Q2KHR2 1363 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 FSD1Q9BTV5 496 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.03■□□□□ 0.16
CREB3L1-205ENST00000616094 AFDNP55196 1824 aaKnown RBP16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 MAP3K11Q16584 847 aa16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 TSGA10IPQ3SY00 556 aa16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 NUP62CLQ9H1M0 184 aa16.02■□□□□ 0.16
CREB3L1-205ENST00000616094 RGPD5Q99666 1765 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 PRAMEF22A3QJZ6 481 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 PSME1Q06323 249 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 KCNF1Q9H3M0 494 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 DTNBO60941 627 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 PDIA6Q15084 440 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 ANKRD24Q8TF21 1146 aa16.01■□□□□ 0.15
CREB3L1-205ENST00000616094 GOLGA6L6A8MZA4 724 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 IGKV5-2P06315 115 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 LIG1P18858 919 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
CREB3L1-205ENST00000616094 KIAA1524Q8TCG1 905 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 SCAND2PQ9GZW5 306 aaPredicted RBP16■□□□□ 0.15
CREB3L1-205ENST00000616094 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
CREB3L1-205ENST00000616094 TYRO3Q06418 890 aa15.99■□□□□ 0.15
CREB3L1-205ENST00000616094 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
CREB3L1-205ENST00000616094 LARP1Q6PKG0 1096 aaKnown RBP15.99■□□□□ 0.15
CREB3L1-205ENST00000616094 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
CREB3L1-205ENST00000616094 DDX19AQ9NUU7 478 aaKnown RBP15.99■□□□□ 0.15
CREB3L1-205ENST00000616094 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CREB3L1-205ENST00000616094 ESCO1Q5FWF5 840 aa15.98■□□□□ 0.15
CREB3L1-205ENST00000616094 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
CREB3L1-205ENST00000616094 FERMT3Q86UX7 667 aa15.98■□□□□ 0.15
CREB3L1-205ENST00000616094 TAF6LQ9Y6J9 622 aa15.98■□□□□ 0.15
CREB3L1-205ENST00000616094 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms