RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.26□□□□□ -1.57
CHD9-221ENST00000615216 TBC1D2Q9BYX2 928 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 KRT23Q9C075 422 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 ERICH4A6NGS2 130 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 MINDY4BA8MYZ0 360 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 IFIT3O14879 490 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 BAG3O95817 575 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 CTR9Q6PD62 1173 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 NCOA7Q8NI08 942 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ERMNQ8TAM6 284 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ABCF2Q9UG63 623 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ZNF518AQ6AHZ1 1483 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ZFYP08048 801 aaPredicted RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 TNNT1P13805 278 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 NLRP5P59047 1200 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 FLIIQ13045 1269 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 KLHL10Q6JEL2 608 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 CNNM2Q9H8M5 875 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ZMYM4Q5VZL5 1548 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 GPATCH8Q9UKJ3 1502 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 SHROOM2Q13796 1616 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 KCNG4Q8TDN1 519 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 GOPCQ9HD26 462 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 KLHL40Q2TBA0 621 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 SPECC1LQ69YQ0 1117 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 PHF23Q9BUL5 403 aaPredicted RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 MTIF2P46199 727 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 METAP2P50579 478 aaKnown RBP eCLIP5.25□□□□□ -1.57
CHD9-221ENST00000615216 MFSD6Q6ZSS7 791 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 ZGPATQ8N5A5 531 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 FERMT2Q96AC1 680 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 GSTTP1A0A1W2PQM5 241 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 RANBP6O60518 1105 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 ADCY5O95622 1261 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 SSFA2P28290 1259 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 TMEM67Q5HYA8 995 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 TMC6Q7Z403 805 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 SREK1Q8WXA9 508 aaKnown RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 TBC1D5Q92609 795 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 PLVAPQ9BX97 442 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 EXOC1Q9NV70 894 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 RASAL2Q9UJF2 1139 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 RTL9Q8NET4 1388 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 WDHD1O75717 1129 aaPredicted RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 PRKCSHP14314 528 aaPredicted RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 PRPHP41219 470 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 TRAF1Q13077 416 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 CEP135Q66GS9 1140 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 MAP3K2Q9Y2U5 619 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 CCDC175P0C221 793 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 STMN4Q9H169 189 aaPredicted RBP5.25□□□□□ -1.57
CHD9-221ENST00000615216 CEP112Q8N8E3 955 aa5.25□□□□□ -1.57
CHD9-221ENST00000615216 URI1O94763 535 aaPredicted RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 LDHCP07864 332 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 UQCRFS1P1P0C7P4 283 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 PIBF1Q8WXW3 757 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 MIS18AQ9NYP9 233 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 CCDC102BQ68D86 513 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 PPM1EQ8WY54 764 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 KAT14Q9H8E8 782 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 SOS1Q07889 1333 aaPredicted RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 ZSCAN23Q3MJ62 389 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 USP37Q86T82 979 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 TMTC2Q8N394 836 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 PPIP5K1Q6PFW1 1433 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 RAPGEF3O95398 923 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 HLA-DOAP06340 250 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 PPP1R42Q7Z4L9 355 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 FERMT3Q86UX7 667 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 UBA5Q9GZZ9 404 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 CCDC40Q4G0X9 1142 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 LRSAM1Q6UWE0 723 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 CRNKL1Q9BZJ0 848 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 NSRP1Q9H0G5 558 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 HSF2BPO75031 334 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 ZSCAN22P10073 491 aaPredicted RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 IARSP41252 1262 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 SRRTQ9BXP5 876 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 TRMT112Q9UI30 125 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 PIK3C2GO75747 1445 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 NEK1Q96PY6 1258 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 CCDC113Q9H0I3 377 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 UHRF1BP1Q6BDS2 1440 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 TRPM2O94759 1503 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 SPAG1Q07617 926 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 TDRD12Q587J7 1177 aaKnown RBP5.24□□□□□ -1.57
CHD9-221ENST00000615216 SNX21Q969T3 373 aa5.24□□□□□ -1.57
CHD9-221ENST00000615216 BMS1Q14692 1282 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 LRRC45Q96CN5 670 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 SCLT1Q96NL6 688 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 RBM27Q9P2N5 1060 aaKnown RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 NUTM2BA6NNL0 878 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 NUTM2EB1AL46 878 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 CTNNA2P26232 953 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 NUTM2AQ8IVF1 878 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 SMARCC1Q92922 1105 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 C16orf45Q96MC5 204 aaPredicted RBP5.23□□□□□ -1.57
CHD9-221ENST00000615216 PHF8Q9UPP1 1060 aa5.23□□□□□ -1.57
CHD9-221ENST00000615216 NME9Q86XW9 330 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms