RNA–Protein interactions for RNA: ENST00000614778.4

PDCD6-212, Transcript of programmed cell death 6, humanhuman

TSL 2 BASIC

Gene PDCD6, Length 1,050 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-212ENST00000614778 NPR1P16066 1061 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
PDCD6-212ENST00000614778 RIC1Q4ADV7 1423 aa20.25■□□□□ 0.83
PDCD6-212ENST00000614778 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 CCDC88AQ3V6T2 1871 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 NFKBIEO00221 500 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 ZNF521Q96K83 1311 aa20.24■□□□□ 0.83
PDCD6-212ENST00000614778 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
PDCD6-212ENST00000614778 ZNF526Q8TF50 670 aaPredicted RBP20.23■□□□□ 0.83
PDCD6-212ENST00000614778 ISCA1Q9BUE6 129 aa20.23■□□□□ 0.83
PDCD6-212ENST00000614778 LAMB2P55268 1798 aa20.22■□□□□ 0.83
PDCD6-212ENST00000614778 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
PDCD6-212ENST00000614778 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
PDCD6-212ENST00000614778 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
PDCD6-212ENST00000614778 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
PDCD6-212ENST00000614778 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
PDCD6-212ENST00000614778 G2E3Q7L622 706 aa20.21■□□□□ 0.83
PDCD6-212ENST00000614778 VAMP4O75379 141 aa20.2■□□□□ 0.82
PDCD6-212ENST00000614778 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
PDCD6-212ENST00000614778 GOLGA2Q08379 1002 aa20.2■□□□□ 0.82
PDCD6-212ENST00000614778 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
PDCD6-212ENST00000614778 TRMT112Q9UI30 125 aaKnown RBP20.2■□□□□ 0.82
PDCD6-212ENST00000614778 SLC51AQ86UW1 340 aa20.19■□□□□ 0.82
PDCD6-212ENST00000614778 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
PDCD6-212ENST00000614778 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
PDCD6-212ENST00000614778 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
PDCD6-212ENST00000614778 STK31Q9BXU1 1019 aa20.18■□□□□ 0.82
PDCD6-212ENST00000614778 CHMP4AQ9BY43 222 aa20.18■□□□□ 0.82
PDCD6-212ENST00000614778 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
PDCD6-212ENST00000614778 SH3TC1Q8TE82 1336 aa20.18■□□□□ 0.82
PDCD6-212ENST00000614778 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 LMNB1P20700 586 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
PDCD6-212ENST00000614778 MIER1Q8N108 512 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
PDCD6-212ENST00000614778 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 MYD88Q99836 296 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
PDCD6-212ENST00000614778 GPBP1L1Q9HC44 474 aaPredicted RBP20.17■□□□□ 0.82
PDCD6-212ENST00000614778 ALDH1B1P30837 517 aa20.16■□□□□ 0.82
PDCD6-212ENST00000614778 MAP3K2Q9Y2U5 619 aa20.16■□□□□ 0.82
PDCD6-212ENST00000614778 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
PDCD6-212ENST00000614778 TAF1P21675 1872 aa20.16■□□□□ 0.82
PDCD6-212ENST00000614778 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 PI4KAP2A4QPH2 592 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
PDCD6-212ENST00000614778 PI4KAP1Q8N8J0 262 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 CRAMP1Q96RY5 1269 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
PDCD6-212ENST00000614778 TAOK3Q9H2K8 898 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
PDCD6-212ENST00000614778 DICER1Q9UPY3 1922 aaKnown RBP20.15■□□□□ 0.82
PDCD6-212ENST00000614778 LTBP3Q9NS15 1303 aa20.14■□□□□ 0.81
PDCD6-212ENST00000614778 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
PDCD6-212ENST00000614778 CCDC93Q567U6 631 aa20.14■□□□□ 0.81
PDCD6-212ENST00000614778 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
PDCD6-212ENST00000614778 KSR2Q6VAB6 950 aa20.14■□□□□ 0.81
PDCD6-212ENST00000614778 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
PDCD6-212ENST00000614778 ABCC4O15439 1325 aa20.12■□□□□ 0.81
PDCD6-212ENST00000614778 IGKV5-2P06315 115 aa20.12■□□□□ 0.81
PDCD6-212ENST00000614778 FLIIQ13045 1269 aa20.12■□□□□ 0.81
PDCD6-212ENST00000614778 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
PDCD6-212ENST00000614778 COL4A1P02462 1669 aa20.11■□□□□ 0.81
PDCD6-212ENST00000614778 KIF3CO14782 793 aa20.11■□□□□ 0.81
PDCD6-212ENST00000614778 CCDC191Q8NCU4 936 aa20.11■□□□□ 0.81
PDCD6-212ENST00000614778 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
PDCD6-212ENST00000614778 NMRK2Q9NPI5 230 aa20.11■□□□□ 0.81
PDCD6-212ENST00000614778 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
PDCD6-212ENST00000614778 PPEF1O14829 653 aaPredicted RBP20.1■□□□□ 0.81
PDCD6-212ENST00000614778 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDCD6-212ENST00000614778 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
PDCD6-212ENST00000614778 CWC25Q9NXE8 425 aaPredicted RBP20.1■□□□□ 0.81
PDCD6-212ENST00000614778 SLFN5Q08AF3 891 aa20.09■□□□□ 0.81
PDCD6-212ENST00000614778 ZNF277Q9NRM2 450 aaPredicted RBP20.09■□□□□ 0.81
PDCD6-212ENST00000614778 ZC3H4Q9UPT8 1303 aaKnown RBP20.08■□□□□ 0.81
PDCD6-212ENST00000614778 E9PSI1 815 aa20.08■□□□□ 0.81
PDCD6-212ENST00000614778 C1QTNF8P60827 252 aa20.08■□□□□ 0.81
PDCD6-212ENST00000614778 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.81
PDCD6-212ENST00000614778 SF3B3Q15393 1217 aaKnown RBP20.08■□□□□ 0.81
PDCD6-212ENST00000614778 CWF19L2Q2TBE0 894 aaKnown RBP20.08■□□□□ 0.81
PDCD6-212ENST00000614778 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.81
PDCD6-212ENST00000614778 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
PDCD6-212ENST00000614778 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
PDCD6-212ENST00000614778 NEURL1BA8MQ27 555 aa20.06■□□□□ 0.8
PDCD6-212ENST00000614778 CC2D2BQ6DHV5 1058 aa20.06■□□□□ 0.8
PDCD6-212ENST00000614778 ATP6V0A2Q9Y487 856 aa20.06■□□□□ 0.8
PDCD6-212ENST00000614778 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
PDCD6-212ENST00000614778 GLTPD2A6NH11 291 aa20.05■□□□□ 0.8
PDCD6-212ENST00000614778 F6X3S4 739 aa20.05■□□□□ 0.8
PDCD6-212ENST00000614778 NEXNQ0ZGT2 675 aa20.05■□□□□ 0.8
PDCD6-212ENST00000614778 GRAPQ13588 217 aa20.05■□□□□ 0.8
PDCD6-212ENST00000614778 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
PDCD6-212ENST00000614778 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms