RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 IQCA1LA6NCM1 817 aa26.73■■□□□ 1.87
PMPCA-208ENST00000614402 CCDC146Q8IYE0 955 aa26.73■■□□□ 1.87
PMPCA-208ENST00000614402 SYNE4Q8N205 404 aa26.73■■□□□ 1.87
PMPCA-208ENST00000614402 ANKRD36CQ5JPF3 1778 aa26.73■■□□□ 1.87
PMPCA-208ENST00000614402 FZD9O00144 591 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 ANXA1P04083 346 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 PARP10Q53GL7 1025 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 CC2D2BQ6DHV5 1058 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 C3orf67Q6ZVT6 689 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 RPGRQ92834 1020 aaKnown RBP26.72■■□□□ 1.87
PMPCA-208ENST00000614402 COL4A5P29400 1685 aa26.72■■□□□ 1.87
PMPCA-208ENST00000614402 CHL1O00533 1208 aa26.71■■□□□ 1.87
PMPCA-208ENST00000614402 PPP1R42Q7Z4L9 355 aa26.71■■□□□ 1.87
PMPCA-208ENST00000614402 CRAMP1Q96RY5 1269 aa26.71■■□□□ 1.87
PMPCA-208ENST00000614402 TAF1DQ9H5J8 278 aaPredicted RBP26.71■■□□□ 1.87
PMPCA-208ENST00000614402 TRIM35Q9UPQ4 493 aa26.71■■□□□ 1.87
PMPCA-208ENST00000614402 RUNDC1Q96C34 613 aa26.7■■□□□ 1.86
PMPCA-208ENST00000614402 ADAMTSL1Q8N6G6 1762 aa26.7■■□□□ 1.86
PMPCA-208ENST00000614402 SLC51AQ86UW1 340 aa26.69■■□□□ 1.86
PMPCA-208ENST00000614402 NEUROD2Q15784 382 aa26.68■■□□□ 1.86
PMPCA-208ENST00000614402 KRT24Q2M2I5 525 aa26.68■■□□□ 1.86
PMPCA-208ENST00000614402 SLC10A5Q5PT55 438 aa26.68■■□□□ 1.86
PMPCA-208ENST00000614402 LDHDQ86WU2 507 aa26.68■■□□□ 1.86
PMPCA-208ENST00000614402 RBM17Q96I25 401 aaKnown RBP26.68■■□□□ 1.86
PMPCA-208ENST00000614402 GRIPAP1Q4V328 841 aa26.67■■□□□ 1.86
PMPCA-208ENST00000614402 COPS6Q7L5N1 327 aa26.67■■□□□ 1.86
PMPCA-208ENST00000614402 UTP14AQ9BVJ6 771 aaKnown RBP26.67■■□□□ 1.86
PMPCA-208ENST00000614402 RNF123Q5XPI4 1314 aa26.66■■□□□ 1.86
PMPCA-208ENST00000614402 PPEF1O14829 653 aaPredicted RBP26.66■■□□□ 1.86
PMPCA-208ENST00000614402 WDR43Q15061 677 aaKnown RBP eCLIP26.66■■□□□ 1.86
PMPCA-208ENST00000614402 XAGE3Q8WTP9 111 aa26.66■■□□□ 1.86
PMPCA-208ENST00000614402 NECTIN2Q92692 538 aa26.66■■□□□ 1.86
PMPCA-208ENST00000614402 DDX21Q9NR30 783 aaKnown RBP eCLIP26.66■■□□□ 1.86
PMPCA-208ENST00000614402 CREBZFQ9NS37 354 aa26.66■■□□□ 1.86
PMPCA-208ENST00000614402 ADAMTS8Q9UP79 889 aa26.66■■□□□ 1.86
PMPCA-208ENST00000614402 PASKQ96RG2 1323 aa26.65■■□□□ 1.86
PMPCA-208ENST00000614402 NLRP3Q96P20 1036 aa26.65■■□□□ 1.86
PMPCA-208ENST00000614402 HACL1Q9UJ83 578 aa26.65■■□□□ 1.86
PMPCA-208ENST00000614402 LAMB2P55268 1798 aa26.65■■□□□ 1.86
PMPCA-208ENST00000614402 NLRP10Q86W26 655 aa26.64■■□□□ 1.86
PMPCA-208ENST00000614402 GPC2Q8N158 579 aa26.64■■□□□ 1.86
PMPCA-208ENST00000614402 HSP90AB3PQ58FF7 597 aa26.63■■□□□ 1.85
PMPCA-208ENST00000614402 JDP2Q8WYK2 163 aa26.63■■□□□ 1.85
PMPCA-208ENST00000614402 EPHX2P34913 555 aa26.62■■□□□ 1.85
PMPCA-208ENST00000614402 AIMP1Q12904 312 aaKnown RBP26.62■■□□□ 1.85
PMPCA-208ENST00000614402 PRKRIP1Q9H875 184 aaPredicted RBP26.62■■□□□ 1.85
PMPCA-208ENST00000614402 LTBP1Q14766 1721 aa26.62■■□□□ 1.85
PMPCA-208ENST00000614402 HOXB7P09629 217 aa26.61■■□□□ 1.85
PMPCA-208ENST00000614402 TCIRG1Q13488 830 aa26.61■■□□□ 1.85
PMPCA-208ENST00000614402 CHPF2Q9P2E5 772 aa26.61■■□□□ 1.85
PMPCA-208ENST00000614402 LAS1LQ9Y4W2 734 aaKnown RBP26.61■■□□□ 1.85
PMPCA-208ENST00000614402 ABCC4O15439 1325 aa26.61■■□□□ 1.85
PMPCA-208ENST00000614402 ITGBL1O95965 494 aaPredicted RBP26.6■■□□□ 1.85
PMPCA-208ENST00000614402 ATP6V0A2Q9Y487 856 aa26.6■■□□□ 1.85
PMPCA-208ENST00000614402 EAPPQ56P03 285 aaPredicted RBP26.59■■□□□ 1.85
PMPCA-208ENST00000614402 TCERG1O14776 1098 aaKnown RBP26.58■■□□□ 1.85
PMPCA-208ENST00000614402 EIF6P56537 245 aaKnown RBP26.58■■□□□ 1.85
PMPCA-208ENST00000614402 COL13A1Q5TAT6 717 aaPredicted RBP26.58■■□□□ 1.85
PMPCA-208ENST00000614402 HDGFL1Q5TGJ6 251 aa26.58■■□□□ 1.85
PMPCA-208ENST00000614402 PNMA8AQ86V59 439 aaPredicted RBP26.58■■□□□ 1.85
PMPCA-208ENST00000614402 LARGE2Q8N3Y3 721 aa26.58■■□□□ 1.85
PMPCA-208ENST00000614402 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
PMPCA-208ENST00000614402 HSPA1AP0DMV8 641 aaKnown RBP26.57■■□□□ 1.84
PMPCA-208ENST00000614402 HSPA1BP0DMV9 641 aaKnown RBP26.57■■□□□ 1.84
PMPCA-208ENST00000614402 HCLS1P14317 486 aaPredicted RBP26.57■■□□□ 1.84
PMPCA-208ENST00000614402 TRMT112Q9UI30 125 aaKnown RBP26.56■■□□□ 1.84
PMPCA-208ENST00000614402 SH3TC1Q8TE82 1336 aa26.56■■□□□ 1.84
PMPCA-208ENST00000614402 CNTNAP1P78357 1384 aa26.56■■□□□ 1.84
PMPCA-208ENST00000614402 DDX60Q8IY21 1712 aaKnown RBP26.56■■□□□ 1.84
PMPCA-208ENST00000614402 SCNN1DP51172 638 aa26.55■■□□□ 1.84
PMPCA-208ENST00000614402 PLBD2Q8NHP8 589 aa26.55■■□□□ 1.84
PMPCA-208ENST00000614402 RTFDC1Q9BY42 306 aaPredicted RBP26.55■■□□□ 1.84
PMPCA-208ENST00000614402 VPS33BQ9H267 617 aa26.55■■□□□ 1.84
PMPCA-208ENST00000614402 DBF4Q9UBU7 674 aaPredicted RBP26.55■■□□□ 1.84
PMPCA-208ENST00000614402 MKRN1Q9UHC7 482 aaKnown RBP26.55■■□□□ 1.84
PMPCA-208ENST00000614402 ZNF853P0CG23 659 aa26.54■■□□□ 1.84
PMPCA-208ENST00000614402 MBIPQ9NS73 344 aa26.54■■□□□ 1.84
PMPCA-208ENST00000614402 GJA3Q9Y6H8 435 aa26.54■■□□□ 1.84
PMPCA-208ENST00000614402 PPIP5K2O43314 1243 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 BBOX1O75936 387 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 AOC3Q16853 763 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 DUSP27Q5VZP5 1158 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 NIM1KQ8IY84 436 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 ISCA1Q9BUE6 129 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 CLEC11AQ9Y240 323 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 LRRC37AA6NMS7 1700 aa26.53■■□□□ 1.84
PMPCA-208ENST00000614402 MAP1SQ66K74 1059 aaPredicted RBP26.52■■□□□ 1.84
PMPCA-208ENST00000614402 ANKRD13DQ6ZTN6 518 aa26.52■■□□□ 1.84
PMPCA-208ENST00000614402 SP8Q8IXZ3 490 aa26.52■■□□□ 1.84
PMPCA-208ENST00000614402 TMX4Q9H1E5 349 aaPredicted RBP26.52■■□□□ 1.84
PMPCA-208ENST00000614402 TMEM88BA6NKF7 163 aa26.51■■□□□ 1.83
PMPCA-208ENST00000614402 GRAPQ13588 217 aa26.51■■□□□ 1.83
PMPCA-208ENST00000614402 CNTROBQ8N137 903 aa26.51■■□□□ 1.83
PMPCA-208ENST00000614402 GRAPLQ8TC17 118 aaPredicted RBP26.51■■□□□ 1.83
PMPCA-208ENST00000614402 TAF1P21675 1872 aa26.51■■□□□ 1.83
PMPCA-208ENST00000614402 DUOX1Q9NRD9 1551 aa26.5■■□□□ 1.83
PMPCA-208ENST00000614402 DDX46Q7L014 1031 aaKnown RBP26.5■■□□□ 1.83
PMPCA-208ENST00000614402 SUPT20HQ8NEM7 779 aa26.5■■□□□ 1.83
PMPCA-208ENST00000614402 HYPKQ9NX55 129 aa26.5■■□□□ 1.83
PMPCA-208ENST00000614402 APAF1O14727 1248 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms