RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SUCLG2Q96I99 432 aa21.93■■□□□ 1.1
SREK1-216ENST00000612404 CLEC4GQ6UXB4 293 aa21.92■■□□□ 1.1
SREK1-216ENST00000612404 ZNF34Q8IZ26 560 aa21.92■■□□□ 1.1
SREK1-216ENST00000612404 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
SREK1-216ENST00000612404 SSFA2P28290 1259 aa21.92■■□□□ 1.1
SREK1-216ENST00000612404 ZNF827Q17R98 1081 aa21.92■■□□□ 1.1
SREK1-216ENST00000612404 NIP7Q9Y221 180 aaKnown RBP eCLIP21.92■■□□□ 1.1
SREK1-216ENST00000612404 H7C1W4 665 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 DEFB132Q7Z7B7 95 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 UBN2Q6ZU65 1347 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 SCN7AQ01118 1682 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 C4AP0C0L4 1744 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 HMMRO75330 724 aa21.91■■□□□ 1.1
SREK1-216ENST00000612404 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
SREK1-216ENST00000612404 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
SREK1-216ENST00000612404 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
SREK1-216ENST00000612404 PNMA6EA0A0J9YXQ4 647 aa21.89■■□□□ 1.1
SREK1-216ENST00000612404 FAM177BA6PVY3 158 aa21.89■■□□□ 1.1
SREK1-216ENST00000612404 CASP7P55210 303 aa21.89■■□□□ 1.1
SREK1-216ENST00000612404 FAM89AQ96GI7 184 aa21.89■■□□□ 1.1
SREK1-216ENST00000612404 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.1
SREK1-216ENST00000612404 USP42Q9H9J4 1324 aaKnown RBP21.89■■□□□ 1.1
SREK1-216ENST00000612404 BICDL1Q6ZP65 573 aa21.89■■□□□ 1.09
SREK1-216ENST00000612404 KAZALD1Q96I82 304 aa21.89■■□□□ 1.09
SREK1-216ENST00000612404 BCL2L12Q9HB09 334 aa21.89■■□□□ 1.09
SREK1-216ENST00000612404 PCCAP05165 728 aaPredicted RBP21.88■■□□□ 1.09
SREK1-216ENST00000612404 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
SREK1-216ENST00000612404 PPP1R42Q7Z4L9 355 aa21.88■■□□□ 1.09
SREK1-216ENST00000612404 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
SREK1-216ENST00000612404 RGL2O15211 777 aa21.88■■□□□ 1.09
SREK1-216ENST00000612404 SRGAP3O43295 1099 aa21.88■■□□□ 1.09
SREK1-216ENST00000612404 EPHA10Q5JZY3 1008 aa21.87■■□□□ 1.09
SREK1-216ENST00000612404 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
SREK1-216ENST00000612404 TBC1D9BQ66K14 1250 aa21.87■■□□□ 1.09
SREK1-216ENST00000612404 CCDC125Q86Z20 511 aa21.87■■□□□ 1.09
SREK1-216ENST00000612404 MSH5O43196 834 aa21.86■■□□□ 1.09
SREK1-216ENST00000612404 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
SREK1-216ENST00000612404 SYNE4Q8N205 404 aa21.85■■□□□ 1.09
SREK1-216ENST00000612404 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
SREK1-216ENST00000612404 MTX1Q13505 466 aa21.84■■□□□ 1.09
SREK1-216ENST00000612404 SMC5Q8IY18 1101 aa21.84■■□□□ 1.09
SREK1-216ENST00000612404 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
SREK1-216ENST00000612404 SETDB2Q96T68 719 aa21.84■■□□□ 1.09
SREK1-216ENST00000612404 DCTPP1Q9H773 170 aa21.83■■□□□ 1.09
SREK1-216ENST00000612404 ANO8Q9HCE9 1232 aaPredicted RBP21.83■■□□□ 1.09
SREK1-216ENST00000612404 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
SREK1-216ENST00000612404 FLAD1Q8NFF5 587 aa21.83■■□□□ 1.08
SREK1-216ENST00000612404 STK32BQ9NY57 414 aa21.83■■□□□ 1.08
SREK1-216ENST00000612404 CHMP3Q9Y3E7 222 aa21.83■■□□□ 1.08
SREK1-216ENST00000612404 SH3TC1Q8TE82 1336 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 CDHR2Q9BYE9 1310 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 IRS4O14654 1257 aaPredicted RBP21.82■■□□□ 1.08
SREK1-216ENST00000612404 GYS1P13807 737 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 FOXO4P98177 505 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 POLA2Q14181 598 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 LMBR1LQ6UX01 489 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
SREK1-216ENST00000612404 NTSR2O95665 410 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 SLC15A2Q16348 729 aa21.82■■□□□ 1.08
SREK1-216ENST00000612404 RABL6Q3YEC7 729 aaPredicted RBP21.81■■□□□ 1.08
SREK1-216ENST00000612404 SKAP1Q86WV1 359 aa21.81■■□□□ 1.08
SREK1-216ENST00000612404 APBB1O00213 710 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 NUTM1Q86Y26 1132 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 EXOC6BQ9Y2D4 811 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 PNPLA7Q6ZV29 1317 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 ANKRD45Q5TZF3 282 aa21.8■■□□□ 1.08
SREK1-216ENST00000612404 GTF2E1P29083 439 aaPredicted RBP21.79■■□□□ 1.08
SREK1-216ENST00000612404 NBPF5PQ86XG9 351 aaPredicted RBP21.79■■□□□ 1.08
SREK1-216ENST00000612404 PLA2G12BQ9BX93 195 aa21.79■■□□□ 1.08
SREK1-216ENST00000612404 SURF6O75683 361 aaKnown RBP21.79■■□□□ 1.08
SREK1-216ENST00000612404 NFIXQ14938 502 aa21.79■■□□□ 1.08
SREK1-216ENST00000612404 HCLS1P14317 486 aaPredicted RBP21.78■■□□□ 1.08
SREK1-216ENST00000612404 NYXQ9GZU5 481 aa21.78■■□□□ 1.08
SREK1-216ENST00000612404 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
SREK1-216ENST00000612404 NPHP1O15259 732 aa21.77■■□□□ 1.08
SREK1-216ENST00000612404 PDE8AO60658 829 aa21.77■■□□□ 1.08
SREK1-216ENST00000612404 NUCB1Q02818 461 aa21.77■■□□□ 1.08
SREK1-216ENST00000612404 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
SREK1-216ENST00000612404 PA2G4Q9UQ80 394 aaKnown RBP21.77■■□□□ 1.08
SREK1-216ENST00000612404 CARMIL3Q8ND23 1372 aa21.77■■□□□ 1.08
SREK1-216ENST00000612404 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
SREK1-216ENST00000612404 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
SREK1-216ENST00000612404 HSP90B1P14625 803 aaKnown RBP21.76■■□□□ 1.07
SREK1-216ENST00000612404 CTSWP56202 376 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 TPTE2Q6XPS3 522 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 COL24A1Q17RW2 1714 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 OS9Q13438 667 aaPredicted RBP21.76■■□□□ 1.07
SREK1-216ENST00000612404 CHD1LQ86WJ1 897 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 KLHDC4Q8TBB5 520 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 LNPKQ9C0E8 428 aa21.76■■□□□ 1.07
SREK1-216ENST00000612404 RGS3P49796 1198 aa21.75■■□□□ 1.07
SREK1-216ENST00000612404 UPF1Q92900 1129 aaKnown RBP eCLIP21.75■■□□□ 1.07
SREK1-216ENST00000612404 MYH3P11055 1940 aa21.75■■□□□ 1.07
SREK1-216ENST00000612404 TTLL11Q8NHH1 800 aa21.74■■□□□ 1.07
SREK1-216ENST00000612404 SIL1Q9H173 461 aa21.74■■□□□ 1.07
SREK1-216ENST00000612404 CSF1RP07333 972 aa21.74■■□□□ 1.07
SREK1-216ENST00000612404 CCDC57Q2TAC2 916 aa21.74■■□□□ 1.07
SREK1-216ENST00000612404 FAM161AQ3B820 660 aa21.74■■□□□ 1.07
SREK1-216ENST00000612404 NLGN1Q8N2Q7 840 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms