RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 TM6SF1Q9BZW5 370 aa28.72■■■□□ 2.19
HOXA4-204ENST00000610970 NUP188Q5SRE5 1749 aa28.72■■■□□ 2.19
HOXA4-204ENST00000610970 AHDC1Q5TGY3 1603 aaPredicted RBP28.72■■■□□ 2.19
HOXA4-204ENST00000610970 H7C1W4 665 aa28.72■■■□□ 2.19
HOXA4-204ENST00000610970 UBE3BQ7Z3V4 1068 aa28.72■■■□□ 2.19
HOXA4-204ENST00000610970 CCDC8Q9H0W5 538 aaPredicted RBP28.72■■■□□ 2.19
HOXA4-204ENST00000610970 NBPF26B4DH59 902 aa28.71■■■□□ 2.19
HOXA4-204ENST00000610970 PTPN12Q05209 780 aaKnown RBP28.71■■■□□ 2.19
HOXA4-204ENST00000610970 NBPF14Q5TI25 921 aa28.71■■■□□ 2.19
HOXA4-204ENST00000610970 NBPF10Q6P3W6 841 aaKnown RBP28.71■■■□□ 2.19
HOXA4-204ENST00000610970 NBPF15Q8N660 670 aa28.71■■■□□ 2.19
HOXA4-204ENST00000610970 ZDHHC9Q9Y397 364 aa28.71■■■□□ 2.19
HOXA4-204ENST00000610970 TTC14Q96N46 770 aa28.7■■■□□ 2.19
HOXA4-204ENST00000610970 UPF3BQ9BZI7 483 aaKnown RBP28.7■■■□□ 2.19
HOXA4-204ENST00000610970 SIL1Q9H173 461 aa28.7■■■□□ 2.19
HOXA4-204ENST00000610970 RFX7Q2KHR2 1363 aa28.69■■■□□ 2.18
HOXA4-204ENST00000610970 BRD1O95696 1058 aa28.69■■■□□ 2.18
HOXA4-204ENST00000610970 MCTP1Q6DN14 999 aa28.69■■■□□ 2.18
HOXA4-204ENST00000610970 CWC25Q9NXE8 425 aaPredicted RBP28.69■■■□□ 2.18
HOXA4-204ENST00000610970 DDX49Q9Y6V7 483 aaKnown RBP28.69■■■□□ 2.18
HOXA4-204ENST00000610970 XRCC6P12956 609 aaKnown RBP eCLIP28.68■■■□□ 2.18
HOXA4-204ENST00000610970 ATP5JP18859 108 aa28.68■■■□□ 2.18
HOXA4-204ENST00000610970 PIP4K2AP48426 406 aaPredicted RBP28.68■■■□□ 2.18
HOXA4-204ENST00000610970 PKP1Q13835 747 aa28.68■■■□□ 2.18
HOXA4-204ENST00000610970 CCDC191Q8NCU4 936 aa28.67■■■□□ 2.18
HOXA4-204ENST00000610970 TEX13AQ9BXU3 409 aaPredicted RBP28.67■■■□□ 2.18
HOXA4-204ENST00000610970 LMBRD1Q9NUN5 540 aa28.67■■■□□ 2.18
HOXA4-204ENST00000610970 CCDC171Q6TFL3 1326 aa28.67■■■□□ 2.18
HOXA4-204ENST00000610970 ATP5J2-PTCD1G3V325 749 aa28.66■■■□□ 2.18
HOXA4-204ENST00000610970 PTCD1O75127 700 aaKnown RBP28.66■■■□□ 2.18
HOXA4-204ENST00000610970 TNNI3KQ59H18 835 aa28.66■■■□□ 2.18
HOXA4-204ENST00000610970 TICAM2Q86XR7 235 aa28.66■■■□□ 2.18
HOXA4-204ENST00000610970 FPGT-TNNI3KV9GXZ4 949 aa28.66■■■□□ 2.18
HOXA4-204ENST00000610970 DDX54Q8TDD1 881 aaKnown RBP28.66■■■□□ 2.18
HOXA4-204ENST00000610970 LIMCH1Q9UPQ0 1083 aa28.66■■■□□ 2.18
HOXA4-204ENST00000610970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.66■■■□□ 2.18
HOXA4-204ENST00000610970 ZKSCAN1P17029 563 aaPredicted RBP28.65■■■□□ 2.18
HOXA4-204ENST00000610970 RASEFQ8IZ41 740 aa28.65■■■□□ 2.18
HOXA4-204ENST00000610970 VSIG10Q8N0Z9 540 aa28.65■■■□□ 2.18
HOXA4-204ENST00000610970 KLHDC4Q8TBB5 520 aa28.65■■■□□ 2.18
HOXA4-204ENST00000610970 STRN4Q9NRL3 753 aa28.65■■■□□ 2.18
HOXA4-204ENST00000610970 NECTIN1Q15223 517 aa28.64■■■□□ 2.18
HOXA4-204ENST00000610970 MAP4K1Q92918 833 aa28.64■■■□□ 2.18
HOXA4-204ENST00000610970 GRPEL1Q9HAV7 217 aa28.64■■■□□ 2.18
HOXA4-204ENST00000610970 TLR7Q9NYK1 1049 aaKnown RBP28.64■■■□□ 2.18
HOXA4-204ENST00000610970 FOXO4P98177 505 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 PTH1RQ03431 593 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 VPS53Q5VIR6 699 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 ZSCAN31Q96LW9 406 aaPredicted RBP28.63■■■□□ 2.17
HOXA4-204ENST00000610970 FSD1Q9BTV5 496 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 BOLA2Q9H3K6 86 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 GPR108Q9NPR9 543 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 NMIQ13287 307 aaPredicted RBP28.63■■■□□ 2.17
HOXA4-204ENST00000610970 ZSWIM6Q9HCJ5 1215 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 ATG3Q9NT62 314 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 TMOD3Q9NYL9 352 aa28.63■■■□□ 2.17
HOXA4-204ENST00000610970 TFCP2Q12800 502 aa28.62■■■□□ 2.17
HOXA4-204ENST00000610970 LMBR1LQ6UX01 489 aa28.62■■■□□ 2.17
HOXA4-204ENST00000610970 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.62■■■□□ 2.17
HOXA4-204ENST00000610970 TJP1Q07157 1748 aa28.62■■■□□ 2.17
HOXA4-204ENST00000610970 A1BGP04217 495 aa28.61■■■□□ 2.17
HOXA4-204ENST00000610970 RNF20Q5VTR2 975 aa28.61■■■□□ 2.17
HOXA4-204ENST00000610970 TTLL7Q6ZT98 887 aa28.61■■■□□ 2.17
HOXA4-204ENST00000610970 WDR33Q9C0J8 1336 aaKnown RBP28.61■■■□□ 2.17
HOXA4-204ENST00000610970 TOGARAM1Q9Y4F4 1720 aa28.61■■■□□ 2.17
HOXA4-204ENST00000610970 PSMA5P28066 241 aa28.6■■■□□ 2.17
HOXA4-204ENST00000610970 AK2P54819 239 aa28.6■■■□□ 2.17
HOXA4-204ENST00000610970 CYP46A1Q9Y6A2 500 aa28.6■■■□□ 2.17
HOXA4-204ENST00000610970 MED23Q9ULK4 1368 aa28.6■■■□□ 2.17
HOXA4-204ENST00000610970 PRPF40BQ6NWY9 871 aaKnown RBP28.6■■■□□ 2.17
HOXA4-204ENST00000610970 SH2B1Q9NRF2 756 aaPredicted RBP28.6■■■□□ 2.17
HOXA4-204ENST00000610970 DBNLQ9UJU6 430 aaKnown RBP28.6■■■□□ 2.17
HOXA4-204ENST00000610970 JCADQ9P266 1359 aa28.59■■■□□ 2.17
HOXA4-204ENST00000610970 COL14A1Q05707 1796 aaKnown RBP28.59■■■□□ 2.17
HOXA4-204ENST00000610970 CASTP20810 708 aaKnown RBP28.59■■■□□ 2.17
HOXA4-204ENST00000610970 NOL8Q76FK4 1167 aaKnown RBP28.59■■■□□ 2.17
HOXA4-204ENST00000610970 RBM8AQ9Y5S9 174 aaKnown RBP28.59■■■□□ 2.17
HOXA4-204ENST00000610970 COL16A1Q07092 1604 aaPredicted RBP28.58■■■□□ 2.17
HOXA4-204ENST00000610970 JARID2Q92833 1246 aaPredicted RBP28.58■■■□□ 2.17
HOXA4-204ENST00000610970 FAM227BQ96M60 508 aa28.58■■■□□ 2.17
HOXA4-204ENST00000610970 PDRG1Q9NUG6 133 aa28.58■■■□□ 2.17
HOXA4-204ENST00000610970 PHLPP1O60346 1717 aa28.58■■■□□ 2.17
HOXA4-204ENST00000610970 TRIM28Q13263 835 aaKnown RBP28.57■■■□□ 2.16
HOXA4-204ENST00000610970 CREB3L3Q68CJ9 461 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 JAKMIP1Q96N16 626 aaKnown RBP28.57■■■□□ 2.16
HOXA4-204ENST00000610970 HMG20BQ9P0W2 317 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 IL15P40933 162 aaPredicted RBP28.57■■■□□ 2.16
HOXA4-204ENST00000610970 KCNJ4P48050 445 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 ZNF445P59923 1031 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 RUFY3Q7L099 469 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 HAUS7Q99871 368 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 ISCA1Q9BUE6 129 aa28.57■■■□□ 2.16
HOXA4-204ENST00000610970 MBD3O95983 291 aa28.56■■■□□ 2.16
HOXA4-204ENST00000610970 TSGA10IPQ3SY00 556 aa28.56■■■□□ 2.16
HOXA4-204ENST00000610970 ALDH8A1Q9H2A2 487 aaPredicted RBP28.56■■■□□ 2.16
HOXA4-204ENST00000610970 PRPF40AO75400 957 aaKnown RBP28.55■■■□□ 2.16
HOXA4-204ENST00000610970 CIAO1O76071 339 aa28.55■■■□□ 2.16
HOXA4-204ENST00000610970 PDIA4P13667 645 aaKnown RBP28.55■■■□□ 2.16
HOXA4-204ENST00000610970 FBXO3Q9UK99 471 aa28.55■■■□□ 2.16
HOXA4-204ENST00000610970 LRP6O75581 1613 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms